RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 WASH3PC4AMC7 463 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 BOLA2-SMG1P6H3BVE0 249 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 hCG_2039718K7EN88 272 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 RNASET2O00584 256 aaKnown RBP12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ADAMDEC1O15204 470 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 FGF19O95750 216 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 B3GALT4O96024 378 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 MT-ND2P03891 347 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 CKMP06732 381 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 CYP2A6P11509 494 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ITPKAP23677 461 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 PSMB9P28065 219 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 PCGF2P35227 344 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 UGT2B10P36537 528 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 MAGEA8P43361 318 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 MASP1P48740 699 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 STARD6P59095 220 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 FCHO2Q0JRZ9 810 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ELP6Q0PNE2 266 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 HKDC1Q2TB90 917 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 XKR6Q5GH73 641 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 CPTPQ5TA50 214 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 VTCN1Q7Z7D3 282 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 THOC6Q86W42 341 aaKnown RBP12.41□□□□□ -0.42
C9orf3-201ENST00000277198 MFSD4AQ8N468 514 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 OR10Q1Q8NGQ4 319 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 LGALS12Q96DT0 336 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 PSD2Q9BQI7 771 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 DOHHQ9BU89 302 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 SIRT5Q9NXA8 310 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 DAPK2Q9UIK4 370 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 SLC25A13Q9UJS0 675 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 FZD4Q9ULV1 537 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 DENND4CQ5VZ89 1909 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 WBP4O75554 376 aaKnown RBP12.41□□□□□ -0.42
C9orf3-201ENST00000277198 SRPRAP08240 638 aaKnown RBP12.41□□□□□ -0.42
C9orf3-201ENST00000277198 LAMP1P11279 417 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 CYP4B1P13584 511 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 NR4A1P22736 598 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 HPCAL1P37235 193 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 MAP2K4P45985 399 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 KCNJ10P78508 379 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 IL1RL1Q01638 556 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 UBXN2BQ14CS0 331 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 RGNQ15493 299 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 TUBA3EQ6PEY2 450 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 TRIM74Q86UV6 250 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 TRIM73Q86UV7 250 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 KIAA1958Q8N8K9 716 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 C11orf65Q8NCR3 313 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ELMO1Q92556 727 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 TAMM41Q96BW9 452 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 DACH2Q96NX9 599 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 EBPLQ9BY08 206 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ITPAQ9BY32 194 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 ATG10Q9H0Y0 220 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 FAM83DQ9H4H8 585 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 VPS4AQ9UN37 437 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 NUP210Q8TEM1 1887 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-201ENST00000277198 FRYLO94915 3013 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 TRAV19A0A0A6YYK7 116 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 CPSF4O95639 269 aaKnown RBP12.4□□□□□ -0.42
C9orf3-201ENST00000277198 CD22P20273 847 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 CD40LGP29965 261 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 KRT20P35900 424 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 SELENOWP63302 87 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 RBBP4Q09028 425 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 DOC2AQ14183 400 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 TBCEQ15813 527 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-201ENST00000277198 CYP2A13Q16696 494 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 LAIR1Q6GTX8 287 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 DPY19L3Q6ZPD9 716 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 ZBTB46Q86UZ6 589 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 LACC1Q8IV20 430 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 P3H2Q8IVL5 708 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 SLC22A15Q8IZD6 547 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 TRAM1L1Q8N609 369 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 GOT1L1Q8NHS2 421 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-201ENST00000277198 NDNFQ8TB73 568 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 ZFP90Q8TF47 636 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 CHTF18Q8WVB6 975 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 MYDGFQ969H8 173 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 SLC38A4Q969I6 547 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 REPS1Q96D71 796 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 CHFRQ96EP1 664 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 BHLHE41Q9C0J9 482 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-201ENST00000277198 SLIRPQ9GZT3 109 aaKnown RBP12.4□□□□□ -0.42
C9orf3-201ENST00000277198 TDP1Q9NUW8 608 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 OSGIN1Q9UJX0 560 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 ERVK-11Q9UQG0 969 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 PIAS3Q9Y6X2 628 aa12.4□□□□□ -0.42
C9orf3-201ENST00000277198 ISPDA4D126 451 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 GABRR3A8MPY1 467 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 SGTAO43765 313 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 FADS2O95864 444 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms