RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 NDUFS4O43181 175 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 CH25HO95992 272 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 C8BP07358 591 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 SAGP10523 405 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 SDC1P18827 310 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 TALDO1P37837 337 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 TUBA4AP68366 448 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 ITPRIPL2Q3MIP1 535 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 NUDT13Q86X67 352 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 LILRA3Q8N6C8 439 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 DNASE1L2Q92874 299 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 GSTK1Q9Y2Q3 226 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 OR1A2Q9Y585 309 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 N6AMT1Q9Y5N5 214 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 EDDM13A0A1B0GTR0 161 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 GNB5O14775 395 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 C6P13671 934 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 GGT1P19440 569 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 RPL4P36578 427 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ID2Q02363 134 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 TIGD6Q17RP2 521 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ATG9BQ674R7 924 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF773Q6PK81 442 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 MACC1Q6ZN28 852 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 AQP11Q8NBQ7 271 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 OR7G3Q8NG95 312 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SMPDL3AQ92484 453 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 POP5Q969H6 163 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SLC6A17Q9H1V8 727 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SRMSQ9H3Y6 488 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 GMEB2Q9UKD1 530 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CLEC4AQ9UMR7 237 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 COL11A1P12107 1806 aaPredicted RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ARHGEF33A8MVX0 844 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 LOC110117498-PIK3R3F6TDL0 507 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SNX4O95219 450 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 APOL3O95236 402 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 BMP10O95393 424 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 LAMP2P13473 410 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 MC1RQ01726 317 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 PMS2P3Q13401 168 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ATG14Q6ZNE5 492 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 FAM20CQ8IXL6 584 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 TRAM1L1Q8N609 369 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 KCNS3Q9BQ31 491 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SPATA7Q9P0W8 599 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SSR3Q9UNL2 185 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ASNA1O43681 348 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ABCB7O75027 752 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 AP2A2O94973 939 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 C9P02748 559 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 C1GALT1C1LP0DN25 315 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ANXA8P13928 327 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CLCN7P51798 805 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CSNK2BP67870 215 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 RUNX3Q13761 415 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 TAB1Q15750 504 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CMPK2Q5EBM0 449 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 FAM78AQ5JUQ0 283 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 POMZP3Q6PJE2 187 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SBSNQ6UWP8 590 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 PRSS58Q8IYP2 241 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 OR52L1Q8NGH7 329 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CNPPD1Q9BV87 410 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 REEP4Q9H6H4 257 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 FAM118AQ9NWS6 357 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ZDHHC7Q9NXF8 308 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 STOX2Q9P2F5 926 aaPredicted RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ERVK-18Q9QC07 812 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 RBMX2Q9Y388 322 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CPSF4LA6NMK7 179 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 LSM1O15116 133 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CMPK1P30085 196 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CD47Q08722 323 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 GNA13Q14344 377 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 CRB2Q5IJ48 1285 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 RBM48Q5RL73 367 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 LIPJQ5W064 366 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ERN2Q76MJ5 926 aaKnown RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF551Q7Z340 670 aaPredicted RBP13.8□□□□□ -0.2
TMEM47-201ENST00000275954 ENKURQ8TC29 256 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 HPS1Q92902 700 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 SLC38A4Q969I6 547 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 RETREG1Q9H6L5 497 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 UTS2RQ9UKP6 389 aa13.8□□□□□ -0.2
TMEM47-201ENST00000275954 A0A1B0GTW7 788 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF860A6NHJ4 632 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 PSMA1P25786 263 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 TIA1P31483 386 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 CCT3P49368 545 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 RNF144AP50876 292 aaPredicted RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 PNLIPRP1P54315 467 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 COPZ1P61923 177 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 PTBP2Q9UKA9 531 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 TSC22D2O75157 780 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 AGXTP21549 392 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 ILF3Q12906 894 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 DDI2Q5TDH0 399 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms