RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 KCNJ15Q99712 375 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 MAP3K3Q99759 626 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 PLCXD1Q9NUJ7 323 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 FFAR3O14843 346 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 GPR42O15529 346 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TOXO94900 526 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 GADD45GO95257 159 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SYPP08247 313 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 RPS12P25398 132 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SPAM1P38567 509 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 EIF2S3P41091 472 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 GMPSP49915 693 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 XKP51811 444 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TKTL1P51854 596 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 BTG1P62324 171 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ST3GAL4Q11206 333 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 LRRC32Q14392 662 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OPCMLQ14982 345 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CHRNA6Q15825 494 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SHFQ7M4L6 423 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ZFP82Q8N141 532 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 EIF4E3Q8N5X7 224 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OR10Q1Q8NGQ4 319 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PHOSPHO1Q8TCT1 267 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ASZ1Q8WWH4 475 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 KIAA1143Q96AT1 154 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 MSLNLQ96KJ4 702 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 DMRTA2Q96SC8 542 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SPSB2Q99619 263 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TUBB1Q9H4B7 451 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 GLOD4Q9HC38 313 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 B3GAT2Q9NPZ5 323 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PCDHGB7Q9Y5F8 929 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PCDHGA6Q9Y5G7 932 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 RNF215Q9Y6U7 377 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TEX13CA0A0J9YWL9 993 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 WASH4PA8MWX3 477 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ISM1B1AKI9 464 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 GSTA4O15217 222 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ADAM12O43184 909 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OR4F21O95013 312 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CNPP09543 421 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 LINC00032P0C843 101 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ACTR1BP42025 376 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ACTR1AP61163 376 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PRKG2Q13237 762 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 DGKZQ13574 1117 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 EXOC3L2Q2M3D2 409 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 MLIPQ5VWP3 458 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OR4F3Q6IEY1 312 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 DDX53Q86TM3 631 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF454Q8N9F8 522 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TWIST2Q8WVJ9 160 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PABPC5Q96DU9 382 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CRELD1Q96HD1 420 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 NARS2Q96I59 477 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ERMAPQ96PL5 475 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 MROH8Q9H579 483 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 GAREM1Q9H706 876 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 NT5DC2Q9H857 520 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF541Q9H0D2 1346 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SULT1C2O00338 296 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 HNRNPDLO14979 420 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PER2O15055 1255 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SLC22A3O75751 556 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PRAMEF1O95521 474 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SERPINA1P01009 418 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 COX5BP10606 129 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 NDUFB7P17568 137 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 UBA1P22314 1058 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CYP2F1P24903 491 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PTGFRP43088 359 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 POLR2JP52435 117 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PSMD4P55036 377 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 NPRL3Q12980 569 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CSHL1Q14406 222 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 P2RY14Q15391 338 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TAF1AQ15573 450 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 EIF2S3LQ2VIR3 472 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 USP39Q53GS9 565 aaKnown RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OR2B11Q5JQS5 317 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 HECTD3Q5T447 861 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CERCAMQ5T4B2 595 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 KANK2Q63ZY3 851 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 ZPBP2Q6X784 338 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 Q6ZPB1 254 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-201ENST00000274071 FTMTQ8N4E7 242 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 UXS1Q8NBZ7 420 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 DMBX1Q8NFW5 382 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OR2T12Q8NG77 320 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 OR4F6Q8NGB9 312 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 MOSPD2Q8NHP6 518 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PEX11GQ96HA9 241 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CCDC115Q96NT0 180 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PFDN5Q99471 154 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PKMYT1Q99640 499 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 TAPBPLQ9BX59 468 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 MAGEB5Q9BZ81 275 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms