RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TMBIM1Q969X1 311 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 TM4SF18Q96CE8 201 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 PHF7Q9BWX1 381 aaPredicted RBP15.88■□□□□ 0.13
CCDC40-201ENST00000269318 ZNF696Q9H7X3 374 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 SLC2A4RGQ9NR83 387 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 GPATCH2Q9NW75 528 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 SPHK1Q9NYA1 384 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 TAAR2Q9P1P5 351 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 DNAJB9Q9UBS3 223 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 NUP214P35658 2090 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 A6NCN8 305 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 PLOD2O00469 737 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 NDUFS4O43181 175 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 NUDT7P0C024 238 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 SMIM18P0DKX4 95 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 AKT2P31751 481 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 RPS9P46781 194 aaKnown RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 MAPK12P53778 367 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 YPEL5P62699 121 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 LRIT3Q3SXY7 679 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 PAGE2Q7Z2X7 111 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 RD3Q7Z3Z2 195 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ADCK2Q7Z695 626 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ST13P4Q8IZP2 240 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 FBXL6Q8N531 539 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ADI1Q9BV57 179 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 SLC6A16Q9GZN6 736 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 AICDAQ9GZX7 198 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 TMEM168Q9H0V1 697 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 MRPS30Q9NP92 439 aaKnown RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ZNF624Q9P2J8 865 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 NDRG2Q9UN36 371 aaKnown RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 SAMD4AQ9UPU9 718 aaKnown RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 PLXND1Q9Y4D7 1925 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 TBX19O60806 448 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 IGHV4-34P06331 123 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 DDCP20711 480 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 KDELR2P33947 212 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 BCL6P41182 706 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 MAGEA2P43356 314 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 MERTKQ12866 999 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ZIC1Q15915 447 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ALG11Q2TAA5 492 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 SLC36A3Q495N2 470 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ZNF852Q6ZMS4 543 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 FKBP9P1Q75LS8 142 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 FAM47BQ8NA70 645 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 FLCNQ8NFG4 579 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 TTLQ8NG68 377 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 RGMAQ96B86 450 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 SARGQ9BW04 601 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 UBE2ZQ9H832 354 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 TMEM184CQ9NVA4 438 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 SMPD3Q9NY59 655 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-201ENST00000269318 ADAM29Q9UKF5 820 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 HS3ST3A1Q9Y663 406 aa15.87■□□□□ 0.13
CCDC40-201ENST00000269318 HEATR5BQ9P2D3 2071 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 LRIT2A6NDA9 550 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 KDM1AO60341 852 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 TNFAIP8O95379 198 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 CST1P01037 141 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SRFP11831 508 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 NDUFS1P28331 727 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SRP54P61011 504 aaKnown RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 TCEA2Q15560 299 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 LRRC23Q53EV4 343 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.86■□□□□ 0.138e-6■■■■■ 27.9
CCDC40-201ENST00000269318 ISLR2Q6UXK2 745 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 NUDT13Q86X67 352 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 MAGEE2Q8TD90 523 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 JPH3Q8WXH2 748 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 QRFPRQ96P65 431 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 C6orf106Q9H6K1 298 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 DDX31Q9H8H2 851 aaKnown RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 MIEF1Q9NQG6 463 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 TAS2R9Q9NYW1 312 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 OR6C2Q9NZP2 312 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 A0A1W2PRB8 838 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 HAT1O14929 419 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 TMPRSS11DO60235 418 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SLC34A2O95436 690 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SEMG1P04279 462 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 NTRK1P04629 796 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 HOXB3P14651 431 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SHMT2P34897 504 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 ACTR1BP42025 376 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 ARSFP54793 590 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 ACTR1AP61163 376 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SLC30A9Q6PML9 568 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 Q6ZSR6 202 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 ABI3BPQ7Z7G0 1075 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 AMIGO1Q86WK6 493 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 NRROSQ86YC3 692 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 NAGSQ8N159 534 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 ZCCHC7Q8N3Z6 543 aaKnown RBP15.86■□□□□ 0.13
CCDC40-201ENST00000269318 OR10Q1Q8NGQ4 319 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 SLC35A5Q9BS91 424 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 TWSG1Q9GZX9 223 aa15.86■□□□□ 0.13
CCDC40-201ENST00000269318 TRNAU1APQ9NX07 287 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms