RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 AMBNQ9NP70 447 aa12.9□□□□□ -0.35
CNTNAP1-201ENST00000264638 MYH2Q9UKX2 1941 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 CLCA1A8K7I4 914 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 PCDHGA12O60330 932 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 VEGFBP49765 207 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SMSP52788 366 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 KCNC3Q14003 757 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SCARB2Q14108 478 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SFT2D3Q587I9 215 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SMARCD3Q6STE5 483 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ERN2Q76MJ5 926 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 AMIGO1Q86WK6 493 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TAS2R3Q9NYW6 316 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 PCDHB11Q9Y5F2 797 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 CLCA3PQ9Y6N3 262 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ZNF840PA6NDX5 716 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 DISC1C4P0D8 188 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ALPPP05187 535 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ANXA3P12429 323 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 CTSOP43234 321 aaPredicted RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 VLDLRP98155 873 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TIFABQ6ZNK6 161 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 C14orf80Q86SX3 495 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 THRSPQ92748 146 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TSNAXQ99598 290 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TMEM246Q9BRR3 403 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ENAMQ9NRM1 1142 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ABCD2Q9UBJ2 740 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ACSL5Q9ULC5 683 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 NOP16Q9Y3C1 178 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 GJB5O95377 273 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 MATN1P21941 496 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 AADACL4Q5VUY2 407 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 NXPE1Q8N323 547 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 KIAA1191Q96A73 305 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 H0YAE9 185 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 ERI3O43414 337 aaKnown RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 FAM189A1O60320 539 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 MYCLP1P12525 358 aaPredicted RBP12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 BMPR1AP36894 532 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 PGDP52209 483 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 NRLP54845 237 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 TAS2R43P59537 309 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SEC23BQ15437 767 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 PLEKHS1Q5SXH7 462 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 SYVN1Q86TM6 617 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
CNTNAP1-201ENST00000264638 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 TCHHQ07283 1943 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 TGFB1P01137 390 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 PET100P0DJ07 73 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 C7P10643 843 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 PRKCHP24723 683 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 LRRN1Q6UXK5 716 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 CHERPQ8IWX8 916 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 ZUFSPQ96AP4 578 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 ZBED3Q96IU2 234 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 NDC1Q9BTX1 674 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 TAC3Q9UHF0 121 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 CXorf49A8MYA2 514 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 MAN2B1O00754 1011 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 PABPC4LP0CB38 370 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 ZNF3P17036 446 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 CLCN7P51798 805 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 RAB33AQ14088 237 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 C10orf62Q5T681 223 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 NUP54Q7Z3B4 507 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 OR10T2Q8NGX3 314 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 SMARCD2Q92925 531 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 RPF2Q9H7B2 306 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 MAGED1Q9Y5V3 778 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 A0A0J9YVX5 310 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 SIX3O95343 332 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 NPPAP01160 153 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 GADD45AP24522 165 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 RORAP35398 523 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 SUOXP51687 545 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 LBX1P52954 281 aa12.88□□□□□ -0.35
CNTNAP1-201ENST00000264638 PTGR1Q14914 329 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms