RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 SLC19A3Q9BZV2 496 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 NMRK2Q9NPI5 230 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 ZNF490Q9ULM2 529 aaPredicted RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 B4DXG7 233 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 UMPSP11172 480 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 HSD17B7P56937 341 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 RAPSNQ13702 412 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 PDZK1Q5T2W1 519 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 TMPRSS11AQ6ZMR5 421 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 BTN2A1Q7KYR7 527 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 TSPYL5Q86VY4 417 aaPredicted RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 FOXJ1Q92949 421 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 KIAA1191Q96A73 305 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 L3HYPDHQ96EM0 354 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 ITPAQ9BY32 194 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 PCTPQ9UKL6 214 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 RAI2Q9Y5P3 530 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 TRPV2Q9Y5S1 764 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 KLF2Q9Y5W3 355 aaPredicted RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 RHOQP17081 205 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 EPHA2P29317 976 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 CDK5R2Q13319 367 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 RCAN2Q14206 197 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 PDSS1Q5T2R2 415 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 VTCN1Q7Z7D3 282 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 TMEM179BQ7Z7N9 219 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 MTERF3Q96E29 417 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 PGAP3Q96FM1 320 aaPredicted RBP13.66□□□□□ -0.22
SCARF1-201ENST00000263071 FAM126AQ9BYI3 521 aaPredicted RBP13.66□□□□□ -0.22
SCARF1-201ENST00000263071 AMBRA1Q9C0C7 1298 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 PRDM5Q9NQX1 630 aaPredicted RBP13.66□□□□□ -0.22
SCARF1-201ENST00000263071 MGAT4AQ9UM21 535 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 LCTP09848 1927 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 CXCR6O00574 342 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 BCKDKO14874 412 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 MTX2O75431 263 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 RAP2AP10114 183 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 ZP3P21754 424 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 FCGRTP55899 365 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 RAB25P57735 213 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 GPR19Q15760 415 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 MON1AQ86VX9 555 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 SLC37A3Q8NCC5 494 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
SCARF1-201ENST00000263071 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
SCARF1-201ENST00000263071 SLC13A3Q8WWT9 602 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 LDAHQ9H6V9 325 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 ACOT13Q9NPJ3 140 aa13.66□□□□□ -0.22
SCARF1-201ENST00000263071 TNPO3Q9Y5L0 923 aaKnown RBP13.66□□□□□ -0.22
SCARF1-201ENST00000263071 INPPL1O15357 1258 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 EPOP01588 193 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 RPLP0P05388 317 aaKnown RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 RHOCP08134 193 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ITPKAP23677 461 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 TNFSF8P32971 234 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 CAPZA1P52907 286 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 TIAL1Q01085 375 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 MVKQ03426 396 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 FADDQ13158 208 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 IRF3Q14653 427 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 PTCHD3Q3KNS1 767 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 FAM92BQ6ZTR7 304 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 PHYKPLQ8IUZ5 450 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ZNF599Q96NL3 588 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ATG10Q9H0Y0 220 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 SLC6A13Q9NSD5 602 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 MUTYHQ9UIF7 546 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 AGO1Q9UL18 857 aaKnown RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 NEU3Q9UQ49 428 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 SLC22A7Q9Y694 548 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 DOCK1Q14185 1865 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 WASHC1A8K0Z3 465 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 K7ERQ8 282 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 STX16O14662 325 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 DSCR3O14972 297 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ZNF623O75123 536 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ULK1O75385 1050 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 OPN1SWP03999 348 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 FGF1P05230 155 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 TNFRSF1BP20333 461 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 HLA-DMAP28067 261 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 EPHA5P54756 1037 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 GTF2H2Q13888 395 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 RTP2Q5QGT7 225 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 GTF2H2CQ6P1K8 395 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 RRM2BQ7LG56 351 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 GOLGA7Q7Z5G4 137 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 OR6C4Q8NGE1 309 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 NETO1Q8TDF5 533 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 TCEAL3Q969E4 200 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 APOLD1Q96LR9 279 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms