RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OR6N1Q8NGY5 312 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 ADAM29Q9UKF5 820 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 TNFRSF11BO00300 401 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 TGFB1P01137 390 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 IRF2P14316 349 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 TGFBR3Q03167 851 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 TGFBIQ15582 683 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 GK5Q6ZS86 529 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 LDB1Q86U70 411 aaPredicted RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF595Q8IYB9 648 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PNLDC1Q8NA58 520 aaKnown RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 TWSG1Q9GZX9 223 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 NLGN3Q9NZ94 848 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 FKBP2P26885 142 aaKnown RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC6A11P48066 632 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 POLE2P56282 527 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 GRHL2Q6ISB3 625 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 MCM8Q9UJA3 840 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PADI1Q9ULC6 663 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM25AB3EWG3 89 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM25CB3EWG5 89 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM25GB3EWG6 89 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM58BPP0C7Q3 252 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 GALK2Q01415 458 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM182AQ5T1J6 154 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 LIX1LQ8IVB5 337 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 ATP6V1C2Q8NEY4 427 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 PHOSPHO1Q8TCT1 267 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 CSNK1G3Q9Y6M4 447 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 PIP5K1BO14986 540 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 MTX2O75431 263 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 ACVR2AP27037 513 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 CCT3P49368 545 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 UBE2NP61088 152 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 TBPL1P62380 186 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 C1orf210Q8IVY1 113 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 DNAJB14Q8TBM8 379 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 UTP23Q9BRU9 249 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 MED31Q9Y3C7 131 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 PRSS51A0A1B0GVH4 220 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 HCRTO43612 131 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 EDF1O60869 148 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 MATN1P21941 496 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 TIA1P31483 386 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■□□ 16.3
PRPF38A-201ENST00000257181 FAUP35544 74 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 XKP51811 444 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 MCATQ8IVS2 390 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC44A3Q8N4M1 653 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 CHST14Q8NCH0 376 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 NPLQ9BXD5 320 aaPredicted RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 RPF2Q9H7B2 306 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 KLRC4-KLRK1H3BQV0 150 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC6A6P31641 620 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 TSFMP43897 325 aaKnown RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 CLCA4Q14CN2 919 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 BCL7AQ4VC05 210 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 ARL13AQ5H913 290 aaPredicted RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 HAVCR2Q8TDQ0 301 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 SCAMP4Q969E2 229 aa12.91□□□□□ -0.34
PRPF38A-201ENST00000257181 SCAMP1O15126 338 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 RPS13P62277 151 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC15A3Q8IY34 581 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 KBTBD8Q8NFY9 601 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF483Q8TF39 744 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MYADMQ96S97 322 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MTERF1Q99551 399 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TRPV4Q9HBA0 871 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TRPV5Q9NQA5 729 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 CIB4A0PJX0 185 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 RFXAPO00287 272 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 LSM1O15116 133 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 HEXAP06865 529 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 C8BP07358 591 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TGFBR2P37173 567 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 PTCHD4Q6ZW05 846 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 OR10Q1Q8NGQ4 319 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MAGEE2Q8TD90 523 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF559Q9BR84 538 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 SPHK1Q9NYA1 384 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MEIS3P2A8K0S8 358 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 NME6O75414 186 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 LPLP06858 475 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 UBL4AP11441 157 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 DNAJA1P31689 397 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 RCVRNP35243 200 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 DLX2Q07687 328 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TRAP1Q12931 704 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 SLC5A12Q1EHB4 618 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 ARHGAP12Q8IWW6 846 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms