RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 RANGRFQ9HD47 186 aaPredicted RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CLN6Q9NWW5 311 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 TRPS1Q9UHF7 1281 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 OSGIN1Q9UJX0 560 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CARD8Q9Y2G2 431 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 PEX16Q9Y5Y5 336 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CKAP5Q14008 2032 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 MYL12BO14950 172 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CKBP12277 381 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 BMPR1AP36894 532 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 HSPB3Q12988 150 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 PTGES3Q15185 160 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 TRMT11Q7Z4G4 463 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 PCNPQ8WW12 178 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 COL21A1Q96P44 957 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CTRCQ99895 268 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 TMCC3Q9ULS5 477 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 YARS2Q9Y2Z4 477 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CFAP20Q9Y6A4 193 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 EYSQ5T1H1 3165 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 TRBC2A0A5B9 178 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ARHGAP33O14559 1287 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF197O14709 1029 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 HAT1O14929 419 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 NME6O75414 186 aaPredicted RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CCNB2O95067 398 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CD160O95971 181 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CH25HO95992 272 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CDK1P06493 297 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 KLK1P06870 262 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 RECQLP46063 649 aaPredicted RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 IFITM2Q01629 132 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 PRKCZQ05513 592 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ZXDCQ2QGD7 858 aaPredicted RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CLEC12AQ5QGZ9 265 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 TRIM46Q7Z4K8 759 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 MMAAQ8IVH4 418 aaKnown RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 MINDY2Q8NBR6 621 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CMTM7Q96FZ5 175 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 IL20RAQ9UHF4 553 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 PSORS1C1Q9UIG5 152 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 MOSPD1Q9UJG1 213 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 PLAGL1Q9UM63 463 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 LYVE1Q9Y5Y7 322 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 A0A1W2PQ09 198 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ANKRD34BA5PLL1 514 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 SCAMP1O15126 338 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 IGSF6O95976 241 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 AOAHP28039 575 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CD70P32970 193 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 UGT2B15P54855 530 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 HBA1P69905 142 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 RGNQ15493 299 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 IQCCQ4KMZ1 466 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CBLL1Q75N03 491 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 THOC6Q86W42 341 aaKnown RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 NPAS3Q8IXF0 933 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CSGALNACT1Q8TDX6 532 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 TP53INP1Q96A56 240 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 PHF21AQ96BD5 680 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 YME1L1Q96TA2 773 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 DOHHQ9BU89 302 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 NDUFAF4Q9P032 175 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 H3BNC9 293 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 MEN1O00255 615 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ENTPD6O75354 484 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 SLC16A8O95907 504 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 PSKH1P11801 424 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 SRSF11Q05519 484 aaKnown RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 RING1Q06587 406 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 HNRNPA0Q13151 305 aaKnown RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF181Q2M3W8 571 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 ERAP2Q6P179 960 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CRTC1Q6UUV9 634 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 B3GLCTQ6Y288 498 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 SLC46A3Q7Z3Q1 461 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 COQ8BQ96D53 544 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 WRAP53Q9BUR4 548 aaKnown RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 IRF2BPLQ9H1B7 796 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 CFAP97Q9P2B7 532 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 PCDHB11Q9Y5F2 797 aa11.5□□□□□ -0.57
USHBP1-201ENST00000252597 SPIN1Q9Y657 262 aaPredicted RBP11.5□□□□□ -0.57
USHBP1-201ENST00000252597 FABP12A6NFH5 140 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ADAMDEC1O15204 470 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 BCHEP06276 602 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 PSMA1P25786 263 aaKnown RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 RPS19P39019 145 aaKnown RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 RNF144AP50876 292 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms