RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TSPAN7P41732 249 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 RPL38P63173 70 aaKnown RBP19.13■□□□□ 0.65
SNRPA-201ENST00000243563 LSM12Q3MHD2 195 aaKnown RBP19.13■□□□□ 0.65
SNRPA-201ENST00000243563 C6orf136Q5SQH8 315 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 TMEM198Q66K66 360 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 COMMD6Q7Z4G1 85 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 KIRREL3Q8IZU9 778 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 CACTIN-AS1Q8N1I8 211 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 METTL4Q8N3J2 472 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 OR8K5Q8NH50 307 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 GAL3ST3Q96A11 431 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 C1orf50Q9BV19 199 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 LRTM1Q9HBL6 345 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 CUTCQ9NTM9 273 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 SERTAD3Q9UJW9 196 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 DLGAP4Q9Y2H0 992 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 B3GALT1Q9Y5Z6 326 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 KNTC1P50748 2209 aa19.13■□□□□ 0.65
SNRPA-201ENST00000243563 TRPC5OSA6NMA1 111 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 NPIPB8E9PQR5 432 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 POLR1CO15160 346 aaPredicted RBP19.12■□□□□ 0.65
SNRPA-201ENST00000243563 ALDOCP09972 364 aaKnown RBP19.12■□□□□ 0.65
SNRPA-201ENST00000243563 ATXN8OSP0DMR3 200 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 TROVE2P10155 538 aaKnown RBP eCLIP19.12■□□□□ 0.65
SNRPA-201ENST00000243563 SDHBP21912 280 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 CERS1P27544 350 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 STXBP1P61764 594 aaKnown RBP19.12■□□□□ 0.65
SNRPA-201ENST00000243563 OLR1P78380 273 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 GRM7Q14831 915 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 AP5B1Q2VPB7 878 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 DEFB134Q4QY38 66 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 CHSY3Q70JA7 882 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 PPP1R3BQ86XI6 285 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 OR9A4Q8NGU2 314 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.12■□□□□ 0.65
SNRPA-201ENST00000243563 MARK4Q96L34 752 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 EBPLQ9BY08 206 aa19.12■□□□□ 0.65
SNRPA-201ENST00000243563 POLR3HQ9Y535 204 aaPredicted RBP19.12■□□□□ 0.65
SNRPA-201ENST00000243563 A0A0A6YYC8 382 aaPredicted RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 C9orf172C9J069 976 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 I3L1I5 382 aaPredicted RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 SEC22BO75396 215 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 SCRG1O75711 98 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 NTRK1P04629 796 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 ALOX12P18054 663 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TPP2P29144 1249 aaPredicted RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 RAP1GDS1P52306 607 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 BTN3A2P78410 334 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 IL11RAQ14626 422 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TMEM35AQ53FP2 167 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TTLL10Q6ZVT0 673 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 CPLX4Q7Z7G2 160 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 ZFAND4Q86XD8 727 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TMEM126BQ8IUX1 230 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 GPR135Q8IZ08 494 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TTC29Q8NA56 475 aaPredicted RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 OR5T3Q8NGG3 340 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 WDR36Q8NI36 951 aaKnown RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 RGMAQ96B86 450 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 CCT8L2Q96SF2 557 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 C1orf109Q9NX04 203 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 KLHL14Q9P2G3 628 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 NAALAD2Q9Y3Q0 740 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TEX51A0A1B0GUA7 166 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 SGK494L7N484 410 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TMPRSS11DO60235 418 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 SEMA3DO95025 777 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 JMJD7P0C870 316 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 CBX1P83916 185 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 MANEAQ5SRI9 462 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 C1orf189Q5VU69 101 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 OR4C11Q6IEV9 310 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 TLDC1Q6P9B6 456 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 SPATA21Q7Z572 469 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 FCRL1Q96LA6 429 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 NLNQ9BYT8 704 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 AKIRIN1Q9H9L7 192 aaPredicted RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 RIC8BQ9NVN3 520 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 FOXJ2Q9P0K8 574 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 AKAP7Q9P0M2 348 aaPredicted RBP19.11■□□□□ 0.65
SNRPA-201ENST00000243563 SLC22A7Q9Y694 548 aa19.11■□□□□ 0.65
SNRPA-201ENST00000243563 CCDC88CQ9P219 2028 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 SPTBN4Q9H254 2564 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 SRRM3A6NNA2 597 aaPredicted RBP19.1■□□□□ 0.65
SNRPA-201ENST00000243563 TXNDC9O14530 226 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 SNX3O60493 162 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 GALR3O60755 368 aaPredicted RBP19.1■□□□□ 0.65
SNRPA-201ENST00000243563 RDH16O75452 317 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 KLK1P06870 262 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 SPINK2P20155 84 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 TACR1P25103 407 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 ATP5A1P25705 553 aaKnown RBP19.1■□□□□ 0.65
SNRPA-201ENST00000243563 SSR2P43308 183 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 SYT16Q17RD7 645 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNRPA-201ENST00000243563 ATP6AP1LQ52LC2 224 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 NXNQ6DKJ4 435 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 TRIM40Q6P9F5 258 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 PIGWQ7Z7B1 504 aa19.1■□□□□ 0.65
SNRPA-201ENST00000243563 ACTRT2Q8TDY3 377 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms