RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ERV3-1Q14264 604 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 LAPTM4AQ15012 233 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 GRHL2Q6ISB3 625 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
SF3B6-201ENST00000233468 BORAQ6PGQ7 559 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 TRABD2AQ86V40 505 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.7□□□□□ -0.7
SF3B6-201ENST00000233468 CYP4X1Q8N118 509 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 C4orf33Q8N1A6 199 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 ANKRD53Q8N9V6 530 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF740Q8NDX6 193 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 ZCCHC10Q8TBK6 192 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 GAL3ST3Q96A11 431 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 APOPT1Q96IL0 206 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 NTMT1Q9BV86 223 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 NOL11Q9H8H0 719 aaKnown RBP10.7□□□□□ -0.7
SF3B6-201ENST00000233468 SEMA3GQ9NS98 782 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 MKS1Q9NXB0 559 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 TRPC4Q9UBN4 977 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 TSC22D4Q9Y3Q8 395 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 VSTM2BA6NLU5 285 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 H0YIV9 168 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 FOXS1O43638 330 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 KLHL41O60662 606 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 SUPT7LO94864 414 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 RPS17P08708 135 aaKnown RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 SFTPCP11686 197 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 PCNAP12004 261 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CPA3P15088 417 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 EPORP19235 508 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 PIK3CBP42338 1070 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CCR10P46092 362 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 RRADP55042 308 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF844Q08AG5 666 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 IFT88Q13099 833 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 SLC9A5Q14940 896 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 RBBP7Q16576 425 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 NKG7Q16617 165 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 TMEM35AQ53FP2 167 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CFAP157Q5JU67 520 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 TTC19Q6DKK2 380 aaPredicted RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 LCN10Q6JVE6 187 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 TRIM40Q6P9F5 258 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 ZYG11AQ6WRX3 759 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 SH2D5Q6ZV89 423 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 MILR1Q7Z6M3 343 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 PTRH1Q86Y79 214 aaKnown RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 SRRM1Q8IYB3 904 aaKnown RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 LAS2Q8IYD9 372 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 IQCKQ8N0W5 287 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 TMEM151AQ8N4L1 468 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 ARHGEF39Q8N4T4 335 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 AFAP1L2Q8N4X5 818 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 METTL27Q8N6F8 245 aaPredicted RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 L3MBTL4Q8NA19 623 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 KCT2Q8NC54 265 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 STT3BQ8TCJ2 826 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 ADAMTS18Q8TE60 1221 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CREB3L4Q8TEY5 395 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CMTM7Q96FZ5 175 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 TGIF2Q9GZN2 237 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 REXO4Q9GZR2 422 aaKnown RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 SPNS1Q9H2V7 528 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 CENPHQ9H3R5 247 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 COPS7BQ9H9Q2 264 aaPredicted RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 PSD3Q9NYI0 1048 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 PCTPQ9UKL6 214 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 G3BP2Q9UN86 482 aaKnown RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 MAN2B2Q9Y2E5 1009 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 ASB1Q9Y576 335 aa10.69□□□□□ -0.7
SF3B6-201ENST00000233468 MRPS18BQ9Y676 258 aaKnown RBP10.69□□□□□ -0.7
SF3B6-201ENST00000233468 IGLV3-12A0A075B6K2 115 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 LRIT2A6NDA9 550 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 PSMD12O00232 456 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ERI3O43414 337 aaKnown RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 DLX3O60479 287 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 PLIN3O60664 434 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 GALR3O60755 368 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 KLF7O75840 302 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 KLHL18O94889 574 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 STATHP02808 62 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 PROCP04070 461 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 HEXBP07686 556 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ZGLP1P0C6A0 271 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF888P0CJ79 500 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 IL1RNP18510 177 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 JAK1P23458 1154 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 MMP11P24347 488 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 PTX3P26022 381 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ARFIP1P53367 373 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 DNAJB13P59910 316 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 RPS18P62269 152 aaKnown RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 CLCQ05315 142 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 CPSF6Q16630 551 aaKnown RBP eCLIP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 DEFB109BQ30KR1 87 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 GGTA1PQ4G0N0 100 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 DEFB134Q4QY38 66 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 TOR1AIP1Q5JTV8 583 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 COLEC12Q5KU26 742 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms