RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 PEX1O43933 1283 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 CDC40O60508 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
FRG1-201ENST00000226798 PRMT3O60678 531 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 B4GALT2O60909 372 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 AVILO75366 819 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 ALOX12P18054 663 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 CCND1P24385 295 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 GRK3P35626 688 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 SLC1A2P43004 574 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 MAGEA6P43360 314 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 NR0B1P51843 470 aaKnown RBP10.8□□□□□ -0.68
FRG1-201ENST00000226798 SKP1P63208 163 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 OLR1P78380 273 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 MEF2AQ02078 507 aaPredicted RBP10.8□□□□□ -0.68
FRG1-201ENST00000226798 CTBP1Q13363 440 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 PWP1Q13610 501 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 SKOR2Q2VWA4 1001 aaPredicted RBP10.8□□□□□ -0.68
FRG1-201ENST00000226798 DEFB134Q4QY38 66 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 AGTRAPQ6RW13 159 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 LCTLQ6UWM7 567 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 MDGA2Q7Z553 956 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 STRA8Q7Z7C7 330 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 TGIF2LYQ8IUE0 185 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 CCDC71Q8IV32 467 aaPredicted RBP10.8□□□□□ -0.68
FRG1-201ENST00000226798 CYP4Z2PQ8N1L4 340 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 TXLNBQ8N3L3 684 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 APCDD1LQ8NCL9 501 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 ABHD11Q8NFV4 315 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 OR4K1Q8NGD4 311 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 PTCHD1Q96NR3 888 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 FOXC2Q99958 501 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 CCDC68Q9H2F9 335 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 PDE10AQ9Y233 779 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 COMMD10Q9Y6G5 202 aa10.8□□□□□ -0.68
FRG1-201ENST00000226798 ZCWPW2A0A1B0GU75 182 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 KLK8O60259 260 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 CEP104O60308 925 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 B3GALT4O96024 378 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 NPPBP16860 134 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 MAOAP21397 527 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 ZNF75DP51815 510 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 NUP107P57740 925 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 GPR85P60893 370 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 BTG2P78543 158 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 SP140Q13342 867 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 NAE1Q13564 534 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 DHX34Q14147 1143 aaKnown RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 KCTD19Q17RG1 926 aaPredicted RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 CES4AQ5XG92 561 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 LRRC8EQ6NSJ5 796 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 NIPAL1Q6NVV3 410 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 KIAA0408Q6ZU52 694 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 ACAD11Q709F0 780 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 CAND1Q86VP6 1230 aaKnown RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 CYP4X1Q8N118 509 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 RNF10Q8N5U6 811 aaKnown RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 OR52N2Q8NGI0 321 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 NT5CQ8TCD5 201 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 NINJ1Q92982 152 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 ZNF669Q96BR6 464 aaPredicted RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 BAG1Q99933 345 aaPredicted RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 DEFB126Q9BYW3 111 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 ATG10Q9H0Y0 220 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 SLC24A3Q9HC58 644 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 ZNF223Q9UK11 482 aaPredicted RBP10.79□□□□□ -0.68
FRG1-201ENST00000226798 ZKSCAN5Q9Y2L8 839 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 ARHGAP21Q5T5U3 1957 aa10.79□□□□□ -0.68
FRG1-201ENST00000226798 TRBV11-1A0A0K0K1C0 115 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 TRBC2A0A5B9 178 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 USP27XA6NNY8 438 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 OR1F1O43749 312 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 ITGA10O75578 1167 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 ZWINTO95229 277 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 C8GP07360 202 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 ZNF888P0CJ79 500 aaPredicted RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 CCR8P51685 355 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 TIAL1Q01085 375 aaKnown RBP eCLIP10.78□□□□□ -0.68
FRG1-201ENST00000226798 FOLH1Q04609 750 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 PMPCAQ10713 525 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 MYBPHQ13203 477 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 THOC5Q13769 683 aaKnown RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 TERF2Q15554 542 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 PHKG1Q16816 387 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 CASC4Q6P4E1 433 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 ABHD13Q7L211 337 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 GSTA5Q7RTV2 222 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 MMP21Q8N119 569 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 CHDHQ8NE62 594 aaPredicted RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 B3GNT7Q8NFL0 401 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 UTP15Q8TED0 518 aaKnown RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 OR4K3Q96R72 315 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 HAUS8Q9BT25 410 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 AARSD1Q9BTE6 412 aaKnown RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 SPNS1Q9H2V7 528 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 ZDHHC11Q9H8X9 412 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 CLK4Q9HAZ1 481 aaKnown RBP10.78□□□□□ -0.68
FRG1-201ENST00000226798 PARVBQ9HBI1 364 aa10.78□□□□□ -0.68
FRG1-201ENST00000226798 NECTIN3Q9NQS3 549 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms