RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 C9P02748 559 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 HRH2P25021 359 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TPMTP51580 245 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ADARP55265 1226 aaKnown RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 E2F1Q01094 437 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 PUM1Q14671 1186 aaKnown RBP eCLIP13.25□□□□□ -0.29
SIX4-201ENST00000216513 UBAP2Q5T6F2 1119 aaKnown RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 IKBIPQ70UQ0 350 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TBC1D21Q8IYX1 336 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 SLC5A8Q8N695 610 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ACVR1CQ8NER5 493 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 MDGA1Q8NFP4 955 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 OR5AR1Q8NGP9 310 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 CDC6Q99741 560 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ASPNQ9BXN1 380 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TRIM2Q9C040 744 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 MS4A12Q9NXJ0 267 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 NRAPQ86VF7 1730 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TTLL8A6PVC2 850 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 RACK1P63244 317 aaKnown RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 MSS51Q4VC12 460 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 SPANXN2Q5MJ10 180 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 CATSPEREQ5SY80 951 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 CARD17Q5XLA6 110 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TICAM1Q8IUC6 712 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 OR4C6Q8NH72 309 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 COL21A1Q96P44 957 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TOR3AQ9H497 397 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TMEM138Q9NPI0 162 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 SAR1AQ9NR31 198 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ING3Q9NXR8 418 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 KIR2DS5A0A0G2JLQ3 304 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 A0A0G2JNG1 304 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KIR2DS3K7RE56 304 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 TBX1O43435 398 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KCNC1P48547 511 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 OR2B6P58173 313 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KIR2DS5Q14953 304 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 ODF4Q2M2E3 257 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
SIX4-201ENST00000216513 SPDYCQ5MJ68 293 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 POC5Q8NA72 575 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KCNC2Q96PR1 638 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 LGR4Q9BXB1 951 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 DDX60Q8IY21 1712 aaKnown RBP13.24□□□□□ -0.29
SIX4-201ENST00000216513 GSC2O15499 205 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 SCRG1O75711 98 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 AHSA1O95433 338 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 EXOC3L2Q2M3D2 409 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 OR7A2PQ8NGA2 310 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 FRS2Q8WU20 508 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 FGF14Q92915 247 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 EPYCQ99645 322 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 CXCL16Q9H2A7 254 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 CD27P26842 260 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 PEX2P28328 305 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KRR1Q13601 381 aaKnown RBP13.24□□□□□ -0.29
SIX4-201ENST00000216513 MOGSQ13724 837 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 GBX1Q14549 363 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 ZNF311Q5JNZ3 666 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 FAM180BQ6P0A1 224 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 FRRS1Q6ZNA5 592 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 OMA1Q96E52 524 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 LTB4R2Q9NPC1 389 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 P2RX2Q9UBL9 471 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 BCHEP06276 602 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 HOXA9P31269 272 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 NIPAL4Q0D2K0 466 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 TAB1Q15750 504 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 NDUFAF6Q330K2 333 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 PRICKLE2Q7Z3G6 844 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 OR6K6Q8NGW6 343 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 OR51V1Q9H2C8 321 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 ZNF304Q9HCX3 659 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KLHL33A6NCF5 533 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 KCNJ13O60928 360 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 AGR2O95994 175 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 F10P00742 488 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 SDHBP21912 280 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 HOXC13P31276 330 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 CTSKP43235 329 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 LASP1Q14847 261 aaKnown RBP13.24□□□□□ -0.29
SIX4-201ENST00000216513 CEACAM20Q6UY09 585 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 DDX1Q92499 740 aaKnown RBP13.24□□□□□ -0.29
SIX4-201ENST00000216513 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 ZFYVE21Q9BQ24 234 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 CD244Q9BZW8 370 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 TMEM168Q9H0V1 697 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 MAN2B2Q9Y2E5 1009 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 DLGAP4Q9Y2H0 992 aa13.24□□□□□ -0.29
SIX4-201ENST00000216513 PRORSD1PA6NEY8 169 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CAPN5O15484 640 aaPredicted RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 FAM189BP81408 668 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CLEC12AQ5QGZ9 265 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 DPPA4Q7L190 304 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 ZNF611Q8N823 705 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms