RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 BEST4Q8NFU0 473 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 OR10Q1Q8NGQ4 319 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 SLC22A8Q8TCC7 542 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 TRAPPC12Q8WVT3 735 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 MARC2Q969Z3 335 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 PELI1Q96FA3 418 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 APOPT1Q96IL0 206 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 LINC00477Q96M19 166 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 ZMYND12Q9H0C1 365 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 PCDHB16Q9NRJ7 776 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 FBXL4Q9UKA2 621 aa-0.18□□□□□ -2.44
LMBR1-222ENST00000638959 MYH14Q7Z406 1995 aaKnown RBP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SYNDIG1LA6NDD5 238 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 COLCA2A8K830 154 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 MAGEB2O15479 319 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 RTN2O75298 545 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 IGHG3P01860 377 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 LONP1P36776 959 aaKnown RBP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 RXRGP48443 463 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 PEX3P56589 373 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 OLR1P78380 273 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 EWSR1Q01844 656 aaKnown RBP eCLIP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 MEF2CQ06413 473 aaPredicted RBP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 CCNG2Q16589 344 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 PPP1R3AQ16821 1122 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 C17orf58Q2M2W7 97 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 QRICH1Q2TAL8 776 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 CNPY1Q3B7I2 92 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 LINC00483Q53H64 154 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SYT14P1Q58G82 188 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SPIN3Q5JUX0 258 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 TATDN1Q6P1N9 297 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 DET1Q7L5Y6 550 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 NUFIP2Q7Z417 695 aaKnown RBP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 ARHGAP22Q7Z5H3 698 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 DCAF4L2Q8NA75 395 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SSMEM1Q8WWF3 244 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 INTS12Q96CB8 462 aaKnown RBP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 RCHY1Q96PM5 261 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 MAP7D2Q96T17 732 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SPIN2AQ99865 258 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SPIN2BQ9BPZ2 258 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 PAPOLGQ9BWT3 736 aaKnown RBP-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 PLA2G2FQ9BZM2 168 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 TBC1D13Q9NVG8 400 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 SENP1Q9P0U3 644 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 CACNG2Q9Y698 323 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 NEDD4P46934 1319 aa-0.19□□□□□ -2.44
LMBR1-222ENST00000638959 IGLV2-33A0A075B6J2 118 aaPredicted RBP-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 A0A1W2PQF6 199 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 USP27XA6NNY8 438 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 FBP2O00757 339 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 OR10H2O60403 315 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 SAP30O75446 220 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 MED24O75448 989 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 RSL1D1O76021 490 aaKnown RBP-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 HPNP05981 417 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 CHMP24386 653 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 PAFAH1B1P43034 410 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 OR1D5P58170 312 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 TRPC3Q13507 836 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 PCGF3Q3KNV8 242 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 ZSCAN23Q3MJ62 389 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 C6orf136Q5SQH8 315 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 TEX35Q5T0J7 233 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 SPATA46Q5T0L3 261 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 TSPO2Q5TGU0 170 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 FIGLAQ6QHK4 219 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 PHOSPHO2Q8TCD6 241 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 POF1BQ8WVV4 589 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 PYM1Q9BRP8 204 aaKnown RBP-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 ULBP2Q9BZM5 246 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 TBC1D17Q9HA65 648 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 RRP7BPQ9NSQ0 103 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 SLC12A6Q9UHW9 1150 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 ZNF230Q9UIE0 474 aaPredicted RBP-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 LEF1Q9UJU2 399 aaPredicted RBP-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 CCPG1Q9ULG6 757 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 ZNF148Q9UQR1 794 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 FBXO7Q9Y3I1 522 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 NPHP3Q7Z494 1330 aa-0.2□□□□□ -2.44
LMBR1-222ENST00000638959 EFCAB7A8K855 629 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 A8MU76 341 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 MCF2LO15068 1137 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SIGLEC5O15389 551 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SEC14L2O76054 403 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SETSIPP0DME0 302 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 RNH1P13489 461 aaKnown RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 TMEM11P17152 192 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 TRIM21P19474 475 aaKnown RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 GABRA5P31644 462 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 RPL9P32969 192 aaKnown RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 RPS9P46781 194 aaKnown RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 OR3A4PP47883 348 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SLC9A3P48764 834 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 HARS2P49590 506 aaKnown RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 ZNF131P52739 623 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 UBE3AQ05086 875 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 CD47Q08722 323 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 GOLGA8DPQ0D2H9 430 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms