RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.88□□□□□ -1.95
VIM-210ENST00000637053 CCNYL2Q5T2Q4 361 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C6orf183Q5T699 404 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PHF19Q5T6S3 580 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C20orf194Q5TEA3 1177 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PRAMEF7Q5VXH5 474 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LIPNQ5VXI9 398 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 RAET1LQ5VY80 246 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ABLIM2Q6H8Q1 611 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SPOPLQ6IQ16 392 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PYHIN1Q6K0P9 492 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C3orf33Q6P1S2 294 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TMEM220Q6QAJ8 160 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FIGLAQ6QHK4 219 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TEPPQ6URK8 271 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PRSS57Q6UWY2 283 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 VSTM1Q6UX27 236 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 VITQ6UXI7 678 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FAM151BQ6UXP7 276 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PLEKHG7Q6ZR37 379 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C3orf62Q6ZUJ4 267 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TMEM26Q6ZUK4 368 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 RFPL4BQ6ZWI9 263 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC35D2Q76EJ3 337 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC26A9Q7LBE3 791 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TRPM8Q7Z2W7 1104 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ERASQ7Z444 233 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 GRASPQ7Z6J2 395 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 TRIM69Q86WT6 500 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 NUDCD3Q8IVD9 361 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 DCP1BQ8IZD4 617 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC38A6Q8IZM9 456 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LINC00518Q8N0U6 118 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C17orf78Q8N4C9 275 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ZGPATQ8N5A5 531 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 BCORP1Q8N888 145 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PTGR2Q8N8N7 351 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 MAB21L3Q8N8X9 362 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 RNF169Q8NCN4 708 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC17A8Q8NDX2 589 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 BEND2Q8NDZ0 799 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CCDC112Q8NEF3 446 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 DNAAF1Q8NEP3 725 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 OR10S1Q8NGN2 331 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 KCNG3Q8TAE7 436 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 GAB3Q8WWW8 586 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PYDC1Q8WXC3 89 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ARNTL2Q8WYA1 636 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FCGR1BQ92637 280 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CAVIN3Q969G5 261 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 NTAN1Q96AB6 310 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLCO4A1Q96BD0 722 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SPSB1Q96BD6 273 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC7A6OSQ96CW6 309 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 LINGO1Q96FE5 620 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PDLIM2Q96JY6 352 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TAAR1Q96RJ0 339 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 NDNQ99608 321 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SMOQ99835 787 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SPAG8Q99932 426 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 RTP3Q9BQQ7 232 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SH2D3AQ9BRG2 576 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 NUDT22Q9BRQ3 303 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FAM213AQ9BRX8 229 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TMEM43Q9BTV4 400 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CHRDL1Q9BU40 450 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SCNM1Q9BWG6 230 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 HINT2Q9BX68 163 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ROPN1BQ9BZX4 212 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 MS4A7Q9GZW8 240 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC22A4Q9H015 551 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TOLLIPQ9H0E2 274 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 RACGAP1Q9H0H5 632 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SIRPDQ9H106 197 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 UPF3AQ9H1J1 476 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC25A32Q9H2D1 315 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 OR51B5Q9H339 312 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LRRN3Q9H3W5 708 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 DPEP2Q9H4A9 486 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 NOL11Q9H8H0 719 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 WDR76Q9H967 626 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ANKRA2Q9H9E1 313 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LMAN1LQ9HAT1 526 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ADAP2Q9NPF8 381 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLAMF7Q9NQ25 335 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PIH1D3Q9NQM4 214 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 TLR9Q9NR96 1032 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 YAE1D1Q9NRH1 226 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SLC6A13Q9NSD5 602 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ARMC1Q9NVT9 282 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.88□□□□□ -1.95
VIM-210ENST00000637053 NDE1Q9NXR1 346 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MTMR4Q9NYA4 1195 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 RDH8Q9NYR8 311 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ADAM22Q9P0K1 906 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CTNNAL1Q9UBT7 734 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SEC14L3Q9UDX4 400 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PISDQ9UG56 409 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 DAPK2Q9UIK4 370 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 UTS2RQ9UKP6 389 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms