RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TIMM22Q9Y584 194 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 ZZEF1O43149 2961 aa15.22■□□□□ 0.03
CLN6-216ENST00000636876 TEX51A0A1B0GUA7 166 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 A0A1B0GX78 115 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 LRIT2A6NDA9 550 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 URADA6NGE7 173 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 MAGEB17A8MXT2 336 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 C1QTNF9BB2RNN3 333 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 STMND1H3BQB6 276 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 AZIN1O14977 448 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 LYPLA1O75608 230 aaPredicted RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 SNUPNO95149 360 aaKnown RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 HSPA4LO95757 839 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 C1QTNF9P0C862 333 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 UROSP10746 265 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ALAS2P22557 587 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 SLC1A6P48664 564 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 HTR6P50406 440 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ATP1A2P50993 1020 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 FOXA1P55317 472 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 RPS13P62277 151 aaKnown RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 FAM53BQ14153 422 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 MAP7Q14244 749 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 SGO1Q5FBB7 561 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 TCHHL1Q5QJ38 904 aaPredicted RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 C1orf189Q5VU69 101 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ATG16L1Q676U5 607 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 C6orf15Q6UXA7 325 aaPredicted RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 TIPARPQ7Z3E1 657 aaKnown RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 DSELQ8IZU8 1212 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 AFAP1L2Q8N4X5 818 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ARFGAP2Q8N6H7 521 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 UTP15Q8TED0 518 aaKnown RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 SELENOMQ8WWX9 145 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ZNF75CPQ92670 426 aaPredicted RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 GAL3ST3Q96A11 431 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 MTFMTQ96DP5 389 aaKnown RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 MVB12AQ96EY5 273 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 GBP5Q96PP8 586 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 F2RL3Q96RI0 385 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 TMEM121BQ9BXQ6 578 aaPredicted RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 KLHL31Q9H511 634 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ZNF395Q9H8N7 513 aaPredicted RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 FARSBQ9NSD9 589 aaKnown RBP15.21■□□□□ 0.03
CLN6-216ENST00000636876 PSD3Q9NYI0 1048 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 NDOR1Q9UHB4 597 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 SLC22A7Q9Y694 548 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 FER1L5A0AVI2 2057 aa15.21■□□□□ 0.03
CLN6-216ENST00000636876 ACACAQ13085 2346 aa15.21■□□□□ 0.02
CLN6-216ENST00000636876 C4orf51C9J302 202 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 MEN1O00255 615 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 KLF11O14901 512 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 FOXS1O43638 330 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 RAD1O60671 282 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 ULK1O75385 1050 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 TGFB1P01137 390 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 PDYNP01213 254 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 FGF4P08620 206 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 ZNF888P0CJ79 500 aaPredicted RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 SMIM10L1P0DMW3 83 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 ALOX12P18054 663 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 PTX3P26022 381 aaPredicted RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 ZNF33BQ06732 778 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 HERC3Q15034 1050 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 TMEM35AQ53FP2 167 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 SH2D4BQ5SQS7 431 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 DEPDC1Q5TB30 811 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 KHDRBS2Q5VWX1 349 aaKnown RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 ZNF385CQ66K41 422 aaPredicted RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 CLEC6AQ6EIG7 209 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 CHSY3Q70JA7 882 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 ABHD13Q7L211 337 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 DTWD1Q8N5C7 304 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 ESX1Q8N693 406 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 DYDC1Q8WWB3 177 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 MS4A6EQ96DS6 147 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 SMIM10Q96HG1 83 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 SORT1Q99523 831 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 C20orf27Q9GZN8 174 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 REXO4Q9GZR2 422 aaKnown RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 OR51B5Q9H339 312 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 CCDC86Q9H6F5 360 aaKnown RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 MANSC1Q9H8J5 431 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.2■□□□□ 0.02
CLN6-216ENST00000636876 TRAF6Q9Y4K3 522 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 WDFY3Q8IZQ1 3526 aa15.2■□□□□ 0.02
CLN6-216ENST00000636876 ASPMQ8IZT6 3477 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 DMXL2Q8TDJ6 3036 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 A0A0A6YYC8 382 aaPredicted RBP15.19■□□□□ 0.02
CLN6-216ENST00000636876 I3L1I5 382 aaPredicted RBP15.19■□□□□ 0.02
CLN6-216ENST00000636876 ERI3O43414 337 aaKnown RBP15.19■□□□□ 0.02
CLN6-216ENST00000636876 SNNO75324 88 aaPredicted RBP15.19■□□□□ 0.02
CLN6-216ENST00000636876 SH3BGRLO75368 114 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 KLK3P07288 261 aaPredicted RBP15.19■□□□□ 0.02
CLN6-216ENST00000636876 HSD3B1P14060 373 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 IL1RNP18510 177 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 ITGAXP20702 1163 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 HSD3B2P26439 372 aa15.19■□□□□ 0.02
CLN6-216ENST00000636876 SERPINB3P29508 390 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms