RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ANKRD53Q8N9V6 530 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 MFSD9Q8NBP5 474 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 FRG2BQ96QU4 278 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PITHD1Q9GZP4 211 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 NT5DC2Q9H857 520 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PILRAQ9UKJ1 303 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PTPRBP23467 1997 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 ANKDD1BA6NHY2 528 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 HCRTR1O43613 425 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 ULK1O75385 1050 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CSO75390 466 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 DKK1O94907 266 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 FGF4P08620 206 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 SPINK2P20155 84 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 VSX2P58304 361 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 AP2B1P63010 937 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 C16orf72Q14CZ0 275 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 GPR19Q15760 415 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 KANK2Q63ZY3 851 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 FRMPD2BQ6IN97 320 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PGM2L1Q6PCE3 622 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 SCIMPQ6UWF3 145 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 ULK2Q8IYT8 1036 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CHCHD4Q8N4Q1 142 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 HUS1BQ8NHY5 278 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 SELENOMQ8WWX9 145 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 RERGQ96A58 199 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 DEPDC7Q96QD5 511 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 OR2A5Q96R48 311 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 MTERF1Q99551 399 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CHRNA10Q9GZZ6 450 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 FARSBQ9NSD9 589 aaKnown RBP13.8□□□□□ -0.2
LINC00339-208ENST00000634934 MRGBPQ9NV56 204 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 IRAK4Q9NWZ3 460 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PLCL2Q9UPR0 1127 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 CLCA2Q9UQC9 943 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 PCDHGA4Q9Y5G9 962 aa13.8□□□□□ -0.2
LINC00339-208ENST00000634934 LOC105369274A0A096LPK9 316 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 LOC102723532A0A0G2JNH3 316 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 H0YGG7 62 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 ZNF195O14628 629 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 SH3BGRLO75368 114 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 SKAP2O75563 359 aaPredicted RBP13.79□□□□□ -0.2
LINC00339-208ENST00000634934 PDYNP01213 254 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 ADRB1P08588 477 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 FOLR1P15328 257 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 CCKBRP32239 447 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 HTR6P50406 440 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 ARF3P61204 181 aaPredicted RBP13.79□□□□□ -0.2
LINC00339-208ENST00000634934 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
LINC00339-208ENST00000634934 PHEXP78562 749 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 RELAQ04206 551 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 ISXQ2M1V0 245 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 DDIASQ8IXT1 998 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 KIRREL3Q8IZU9 778 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 OR4N4Q8N0Y3 316 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 RNF175Q8N4F7 328 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 AGBL5Q8NDL9 886 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 TTLQ8NG68 377 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 ACTRT2Q8TDY3 377 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 WDR60Q8WVS4 1066 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 SLC13A3Q8WWT9 602 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 CMTM5Q96DZ9 223 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 THAP11Q96EK4 314 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 HBEGFQ99075 208 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 MACROD1Q9BQ69 325 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 SARGQ9BW04 601 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 VCX3BQ9H321 246 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 SYNPO2LQ9H987 977 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 AKAP7Q9P0M2 348 aaPredicted RBP13.79□□□□□ -0.2
LINC00339-208ENST00000634934 DNAJC15Q9Y5T4 150 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 AP1M2Q9Y6Q5 423 aa13.79□□□□□ -0.2
LINC00339-208ENST00000634934 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 EFCAB7A8K855 629 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 TMEM150CB9EJG8 249 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 NDUFS4O43181 175 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 HYAL3O43820 417 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-208ENST00000634934 KRT36O76013 467 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 AHRP35869 848 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 FOXM1Q08050 763 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 ABRAXAS2Q15018 415 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 PDCD2Q16342 344 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-208ENST00000634934 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 VN1R5Q7Z5H4 357 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 VN1R4Q7Z5H5 301 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 ASPGQ86U10 573 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 TMEM126BQ8IUX1 230 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 TRPV3Q8NET8 790 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 TWIST2Q8WVJ9 160 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 GATA6Q92908 595 aa13.78□□□□□ -0.2
LINC00339-208ENST00000634934 FAR2Q96K12 515 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms