RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-209	ENST00000634889	LRIT2	A6NDA9	550 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889		H0YIV9	168 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	OR7A17	O14581	309 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PLIN3	O60664	434 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	GALR3	O60755	368 aa	Predicted RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CLDN9	O95484	217 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	OTC	P00480	354 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	FURIN	P09958	794 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZGLP1	P0C6A0	271 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZNF888	P0CJ79	500 aa	Predicted RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ATXN8OS	P0DMR3	200 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SMIM10L1	P0DMW3	83 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PRKAA2	P54646	552 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	NAA20	P61599	178 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SNRPN	P63162	240 aa	Known RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ADPRM	Q3LIE5	342 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	KRT71	Q3SY84	523 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TOR1AIP1	Q5JTV8	583 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZNF678	Q5SXM1	525 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	FAM69B	Q5VUD6	431 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZYG11A	Q6WRX3	759 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PRSS41	Q7RTY9	318 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	VN1R5	Q7Z5H4	357 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PDSS2	Q86YH6	399 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MYLK4	Q86YV6	388 aa	Predicted RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SRRM1	Q8IYB3	904 aa	Known RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	C4orf33	Q8N1A6	199 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	BANP	Q8N9N5	519 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	OR7G3	Q8NG95	312 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	STT3B	Q8TCJ2	826 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ATP6V1E2	Q96A05	226 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MIEF2	Q96C03	454 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	L3HYPDH	Q96EM0	354 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	WBP1	Q96G27	269 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SMIM10	Q96HG1	83 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	NSUN5	Q96P11	429 aa	Known RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	UBL7	Q96S82	380 aa	Predicted RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	IQCG	Q9H095	443 aa	Known RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZBTB26	Q9HCK0	441 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SEMA3G	Q9NS98	782 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SENP1	Q9P0U3	644 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MID2	Q9UJV3	735 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	NAALAD2	Q9Y3Q0	740 aa		13.98	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CACNA1B	Q00975	2339 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889		A0A088AWK7	358 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889		G3V2L1	256 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SGK494	L7N484	410 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	IGHE	P01854	428 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	UMOD	P07911	640 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CYC1	P08574	325 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MYL2	P10916	166 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	IMPDH1	P20839	514 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZNF10	P21506	573 aa	Predicted RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	IL10	P22301	178 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MMP11	P24347	488 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	HNRNPH1	P31943	449 aa	Known RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PIK3CB	P42338	1070 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CCNG1	P51959	295 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PHEX	P78562	749 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	KLC1	Q07866	573 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TBR1	Q16650	682 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	GGTA1P	Q4G0N0	100 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	DEFB134	Q4QY38	66 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	C10orf62	Q5T681	223 aa	Predicted RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	LRIG3	Q6UXM1	1119 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	OR2L5	Q8NG80	312 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	OR52B6	Q8NGF0	335 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZNF473	Q8WTR7	871 aa	Known RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	APOBEC4	Q8WW27	367 aa	Known RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CCT6B	Q92526	530 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MS4A6E	Q96DS6	147 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ZIM3	Q96PE6	472 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TMEM237	Q96Q45	408 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SMC6	Q96SB8	1091 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	REXO4	Q9GZR2	422 aa	Known RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SOX17	Q9H6I2	414 aa	Predicted RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MAN2B2	Q9Y2E5	1009 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	STK38L	Q9Y2H1	464 aa		13.97	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PCDH17	O14917	1159 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	RGS16	O15492	202 aa	Predicted RBP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CTIF	O43310	598 aa	Known RBP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ERI3	O43414	337 aa	Known RBP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	RDH16	O75452	317 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SUPT7L	O94864	414 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MLYCD	O95822	493 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TBX6	O95947	436 aa	Predicted RBP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	PCNA	P12004	261 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	ARL1	P40616	181 aa	Predicted RBP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CCR10	P46092	362 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	RAB8A	P61006	207 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	MAT1A	Q00266	395 aa	Known RBP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CLC	Q05315	142 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TGM3	Q08188	693 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TRAF3	Q13114	568 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	SYT16	Q17RD7	645 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	DEFB109B	Q30KR1	87 aa		13.96	□□□□□ -0.17
CDC42BPB-209	ENST00000634889	TMEM35A	Q53FP2	167 aa		13.96	□□□□□ -0.17

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