RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 EIF2S1P05198 315 aaKnown RBP17.75■□□□□ 0.43
PNKP-224ENST00000631020 CCNYL3P0C7X3 344 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 RCN2Q14257 317 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 ARL13AQ5H913 290 aaPredicted RBP17.75■□□□□ 0.43
PNKP-224ENST00000631020 PAGE2BQ5JRK9 111 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 PWWP2BQ6NUJ5 590 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 MED27Q6P2C8 311 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 GPRIN3Q6ZVF9 776 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.75■□□□□ 0.43
PNKP-224ENST00000631020 LAS2Q8IYD9 372 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 OR7G3Q8NG95 312 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 CREB3L4Q8TEY5 395 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 N4BP2L2Q92802 583 aaPredicted RBP17.75■□□□□ 0.43
PNKP-224ENST00000631020 FAM117AQ9C073 453 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 C20orf27Q9GZN8 174 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 PITHD1Q9GZP4 211 aaPredicted RBP17.75■□□□□ 0.43
PNKP-224ENST00000631020 MID1IP1Q9NPA3 183 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 ZFP69BQ9UJL9 534 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 PADI1Q9ULC6 663 aa17.75■□□□□ 0.43
PNKP-224ENST00000631020 H0YIV9 168 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 FFAR3O14843 346 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 NKX2-8O15522 239 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 GPR42O15529 346 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 OR2B3O76000 313 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 TCN2P20062 427 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 AHRP35869 848 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 DLSTP36957 453 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 FOXA1P55317 472 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 PKNOX1P55347 436 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 ITGA1P56199 1179 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 SNRPNP63162 240 aaKnown RBP17.74■□□□□ 0.43
PNKP-224ENST00000631020 ZRSR2Q15696 482 aaKnown RBP17.74■□□□□ 0.43
PNKP-224ENST00000631020 HIST2H2ACQ16777 129 aaPredicted RBP17.74■□□□□ 0.43
PNKP-224ENST00000631020 HKDC1Q2TB90 917 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 PRTGQ2VWP7 1150 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 GGTA1PQ4G0N0 100 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 HIST2H2AA3Q6FI13 130 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 PPP1R14CQ8TAE6 165 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 SREK1Q8WXA9 508 aaKnown RBP17.74■□□□□ 0.43
PNKP-224ENST00000631020 KCNA7Q96RP8 456 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 RHBGQ9H310 441 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 FANCEQ9HB96 536 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 PCDHB3Q9Y5E6 796 aa17.74■□□□□ 0.43
PNKP-224ENST00000631020 C21orf140B9A014 251 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 LYPLA1O75608 230 aaPredicted RBP17.73■□□□□ 0.43
PNKP-224ENST00000631020 TBX6O95947 436 aaPredicted RBP17.73■□□□□ 0.43
PNKP-224ENST00000631020 NEFHP12036 1026 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 NEK2P51955 445 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 ASPGQ86U10 573 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 RNF175Q8N4F7 328 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 ARHGEF39Q8N4T4 335 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 TBC1D19Q8N5T2 526 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 ZNF655Q8N720 491 aaPredicted RBP17.73■□□□□ 0.43
PNKP-224ENST00000631020 CSNK1A1LQ8N752 337 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 CDYL2Q8N8U2 506 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 WDR20Q8TBZ3 569 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 SLC13A3Q8WWT9 602 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 RERGQ96A58 199 aaPredicted RBP17.73■□□□□ 0.43
PNKP-224ENST00000631020 SLC25A18Q9H1K4 315 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 LHX9Q9NQ69 397 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 TRPS1Q9UHF7 1281 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 CROTQ9UKG9 612 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 STK38LQ9Y2H1 464 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 PCDHGA11Q9Y5H2 935 aa17.73■□□□□ 0.43
PNKP-224ENST00000631020 FITM1A5D6W6 292 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 J3QKU1 62 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 MED26O95402 600 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 CAPN1P07384 714 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 F8A1P23610 371 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 GRK2P25098 689 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 SERPINB5P36952 375 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 GCGRP47871 477 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 POLE2P56282 527 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 GALNT1Q10472 559 aaPredicted RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 BST1Q10588 318 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 HYAL2Q12891 473 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 STX3Q13277 289 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 TCTE1Q5JU00 501 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 TCHHL1Q5QJ38 904 aaPredicted RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 CUZD1Q86UP6 607 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 SLC38A9Q8NBW4 561 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 KCT2Q8NC54 265 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 ZNF473Q8WTR7 871 aaKnown RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 UBE2E3Q969T4 207 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 MTFMTQ96DP5 389 aaKnown RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 LRFN5Q96NI6 719 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 AICDAQ9GZX7 198 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 FARSBQ9NSD9 589 aaKnown RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 INTS9Q9NV88 658 aaKnown RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 RUVBL1Q9Y265 456 aaKnown RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 TSC22D4Q9Y3Q8 395 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 TIMM22Q9Y584 194 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 ANKDD1BA6NHY2 528 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 TMEM114B3SHH9 223 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 ZSCAN9O15535 394 aaPredicted RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 ZNF749O43361 778 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 CPNE3O75131 537 aaKnown RBP17.72■□□□□ 0.43
PNKP-224ENST00000631020 SERPIND1P05546 499 aa17.72■□□□□ 0.43
PNKP-224ENST00000631020 PCNAP12004 261 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms