RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 UTP15Q8TED0 518 aaKnown RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 ZNF483Q8TF39 744 aaPredicted RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 THAP4Q8WY91 577 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 CCT6BQ92526 530 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 TTC9Q92623 222 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 EXTL1Q92935 676 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 UBE2E3Q969T4 207 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 MIEF2Q96C03 454 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 SMIM10Q96HG1 83 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 NSUN5Q96P11 429 aaKnown RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 TMEM237Q96Q45 408 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 ERVK-6Q9BXR3 956 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 AICDAQ9GZX7 198 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 KLHL31Q9H511 634 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 SOX17Q9H6I2 414 aaPredicted RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 NOL11Q9H8H0 719 aaKnown RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 ACTR8Q9H981 624 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 ZBTB26Q9HCK0 441 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 MKKSQ9NPJ1 570 aaPredicted RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 MKS1Q9NXB0 559 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 TRPC4Q9UBN4 977 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 NXT1Q9UKK6 140 aaKnown RBP8.41□□□□□ -1.06
CHD2-216ENST00000629104 GRID1Q9ULK0 1009 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 POLHQ9Y253 713 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 NAALAD2Q9Y3Q0 740 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 MAP4K5Q9Y4K4 846 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 NBEAQ8NFP9 2946 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 SCN2AQ99250 2005 aa8.41□□□□□ -1.06
CHD2-216ENST00000629104 LRIT2A6NDA9 550 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 C4orf51C9J302 202 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 G3V2L1 256 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ERVH48-1M5A8F1 160 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 FFAR3O14843 346 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 GPR42O15529 346 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 PLIN3O60664 434 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 GALR3O60755 368 aaPredicted RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 RDH16O75452 317 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 KLHL18O94889 574 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 B3GALT4O96024 378 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 PROCP04070 461 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ZNF888P0CJ79 500 aaPredicted RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 IMPDH1P20839 514 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 SERPINB1P30740 379 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 HNRNPH1P31943 449 aaKnown RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 OTX2P32243 289 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 PRKAA2P54646 552 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 RAB8AP61006 207 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 SKP1P63208 163 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 KLC1Q07866 573 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 TRAF3Q13114 568 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 DEFB109BQ30KR1 87 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ADPRMQ3LIE5 342 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 LINC00303Q3SY05 128 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 KRT71Q3SY84 523 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 DEFB134Q4QY38 66 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ZNF678Q5SXM1 525 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 NIPAL1Q6NVV3 410 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 BORAQ6PGQ7 559 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ZYG11AQ6WRX3 759 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 SHISA6Q6ZSJ9 500 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 RPS27LQ71UM5 84 aaKnown RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 RAB43Q86YS6 212 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 MYLK4Q86YV6 388 aaPredicted RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 ZC3H7AQ8IWR0 971 aaKnown RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 SRRM1Q8IYB3 904 aaKnown RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 BANPQ8N9N5 519 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 L3MBTL4Q8NA19 623 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 OR7G3Q8NG95 312 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 OR52B6Q8NGF0 335 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 GAL3ST3Q96A11 431 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 MS4A6EQ96DS6 147 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 L3HYPDHQ96EM0 354 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 APOPT1Q96IL0 206 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ZIM3Q96PE6 472 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 CDK15Q96Q40 435 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 UBL7Q96S82 380 aaPredicted RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 NTMT1Q9BV86 223 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 YIPF2Q9BWQ6 316 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 TGIF2Q9GZN2 237 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 C12orf65Q9H3J6 166 aaKnown RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 SEMA4BQ9NPR2 832 aaPredicted RBP8.4□□□□□ -1.06
CHD2-216ENST00000629104 C14orf105Q9NVL8 296 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 HCN3Q9P1Z3 774 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 MAN2B2Q9Y2E5 1009 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 RNF11Q9Y3C5 154 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 TSC22D4Q9Y3Q8 395 aa8.4□□□□□ -1.06
CHD2-216ENST00000629104 ATMQ13315 3056 aa8.4□□□□□ -1.07
CHD2-216ENST00000629104 ZNF860A6NHJ4 632 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 H0YIV9 168 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
CHD2-216ENST00000629104 SUPT7LO94864 414 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 BMP10O95393 424 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 CLDN9O95484 217 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 MYL2P10916 166 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 PCNAP12004 261 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 TSPAN8P19075 237 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 MMP11P24347 488 aa8.39□□□□□ -1.07
CHD2-216ENST00000629104 HPDP32754 393 aaPredicted RBP8.39□□□□□ -1.07
CHD2-216ENST00000629104 ARL1P40616 181 aaPredicted RBP8.39□□□□□ -1.07
CHD2-216ENST00000629104 CCNG1P51959 295 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms