RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 CENPHQ9H3R5 247 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 WDR54Q9H977 334 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 TSC22D4Q9Y3Q8 395 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 PCDHGA11Q9Y5H2 935 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 H0YIV9 168 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 TYROBPO43914 113 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 CNOT3O75175 753 aaKnown RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 KLF7O75840 302 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 TBX6O95947 436 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 OTCP00480 354 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ZNF888P0CJ79 500 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 CPA3P15088 417 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 H2AFXP16104 143 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ALOX12P18054 663 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 HPDP32754 393 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ARL1P40616 181 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 DNAJB13P59910 316 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 STXBP1P61764 594 aaKnown RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 CLCQ05315 142 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 RBBP7Q16576 425 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 GGTA1PQ4G0N0 100 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 TOR1AIP1Q5JTV8 583 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 NIPAL1Q6NVV3 410 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 EXOC3L1Q86VI1 746 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ARMC2Q8NEN0 867 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 TCP10LQ8TDR4 215 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 UTP15Q8TED0 518 aaKnown RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ZNF473Q8WTR7 871 aaKnown RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 REPS1Q96D71 796 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 FAM111AQ96PZ2 611 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 CDK15Q96Q40 435 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 AICDAQ9GZX7 198 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 KLHL31Q9H511 634 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 OXSMQ9NWU1 459 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 CTSFQ9UBX1 484 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ZNF282Q9UDV7 671 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ADGRE2Q9UHX3 823 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 RNF11Q9Y3C5 154 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ACTL7BQ9Y614 415 aa19.26■□□□□ 0.67
PTCD3-220ENST00000627371 ITPR1Q14643 2758 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 IGLV3-12A0A075B6K2 115 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 LRIT2A6NDA9 550 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 NKX2-8O15522 239 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 KLHL18O94889 574 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 MYZAPP0CAP1 466 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SMIM10L1P0DMW3 83 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 PCNAP12004 261 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 TSPAN8P19075 237 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 HNRNPH1P31943 449 aaKnown RBP19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SKP1P63208 163 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 CDC20Q12834 499 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 PCLAFQ15004 111 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 NKG7Q16617 165 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 CPSF6Q16630 551 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTCD3-220ENST00000627371 ADPRMQ3LIE5 342 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 PDSS2Q86YH6 399 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 OR4F6Q8NGB9 312 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 OR2Y1Q8NGV0 311 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 TRPC4APQ8TEL6 797 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 GAL3ST3Q96A11 431 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 ZBTB9Q96C00 473 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 MS4A6EQ96DS6 147 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SMIM10Q96HG1 83 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 MAGEB10Q96LZ2 347 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SPSB2Q99619 263 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SSU72Q9NP77 194 aaKnown RBP19.25■□□□□ 0.67
PTCD3-220ENST00000627371 ACSS2Q9NR19 701 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SLC17A7Q9P2U7 560 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 NXT1Q9UKK6 140 aaKnown RBP19.25■□□□□ 0.67
PTCD3-220ENST00000627371 PTRH2Q9Y3E5 179 aaKnown RBP19.25■□□□□ 0.67
PTCD3-220ENST00000627371 NAALAD2Q9Y3Q0 740 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 MAP4K5Q9Y4K4 846 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 SCN2AQ99250 2005 aa19.25■□□□□ 0.67
PTCD3-220ENST00000627371 VSTM2BA6NLU5 285 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 SGK494L7N484 410 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 PPP6CO00743 305 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 GALR3O60755 368 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-220ENST00000627371 MLYCDO95822 493 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 FOLR3P41439 243 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 NAA20P61599 178 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 OCA2Q04671 838 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 IL10RAQ13651 578 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 ERV3-1Q14264 604 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 UGT8Q16880 541 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 DEFB134Q4QY38 66 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 FAM69BQ5VUD6 431 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 LIPMQ5VYY2 423 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 GPR155Q7Z3F1 870 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 MILR1Q7Z6M3 343 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 HUS1BQ8NHY5 278 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 ZNF382Q96SR6 550 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 MS4A8Q9BY19 250 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 REXO4Q9GZR2 422 aaKnown RBP19.24■□□□□ 0.67
PTCD3-220ENST00000627371 STMN4Q9H169 189 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-220ENST00000627371 GSTO2Q9H4Y5 243 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 MKKSQ9NPJ1 570 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-220ENST00000627371 TRPC4Q9UBN4 977 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 STK38LQ9Y2H1 464 aa19.24■□□□□ 0.67
PTCD3-220ENST00000627371 A0A1B0GTL3 188 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 C4orf51C9J302 202 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms