RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TCEAL4Q96EI5 215 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 TPD52L3Q96J77 140 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 LRIG1Q96JA1 1093 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 BBS2Q9BXC9 721 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 EBPLQ9BY08 206 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 LMAN2LQ9H0V9 348 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 PRO3102Q9H379 93 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 ZDHHC6Q9H6R6 413 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 AKAP7Q9P0M2 348 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 B4GALT6Q9UBX8 382 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 BLOC1S6Q9UL45 172 aa6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 EXO1Q9UQ84 846 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 NUP214P35658 2090 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-244ENST00000627109 C5orf67F2Z3F1 127 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 SCAMP2O15127 329 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 GCM2O75603 506 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 DIRAS1O95057 198 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 FGF19O95750 216 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 FTH1P02794 183 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF12P17014 697 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 CCNA2P20248 432 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 FPR1P21462 350 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 AQP1P29972 269 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ALDH4A1P30038 563 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 PBLDP30039 288 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 HNF4AP41235 474 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 RECQLP46063 649 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 OCA2Q04671 838 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 AQP6Q13520 282 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 MEP1AQ16819 746 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ARHGAP15Q53QZ3 475 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 OR2T5Q6IEZ7 315 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 GDPD4Q6W3E5 623 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 DPY19L3Q6ZPD9 716 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 PRSS48Q7RTY5 328 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 CYP2U1Q7Z449 544 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 HORMAD1Q86X24 394 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 YAF2Q8IY57 180 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 LAS2Q8IYD9 372 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 SMYD1Q8NB12 490 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 OR2T29Q8NH02 315 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 CHPT1Q8WUD6 406 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 MED8Q96G25 268 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 OR4K3Q96R72 315 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 EHD1Q9H4M9 534 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ARMC7Q9H6L4 198 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 UBE2ZQ9H832 354 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 LTB4R2Q9NPC1 389 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 PLCXD1Q9NUJ7 323 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ITGB1BP2Q9UKP3 347 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 RUVBL1Q9Y265 456 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 PCDHB11Q9Y5F2 797 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 RIF1Q5UIP0 2472 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 FADS2P1A8MWK0 482 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 FOXE1O00358 373 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 RNASET2O00584 256 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 HTR1BP28222 390 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 PCGF2P35227 344 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 LIMS1P48059 325 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 MLLT10P55197 1068 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 POLR2LP62875 67 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 KCNJ10P78508 379 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 EEF1A2Q05639 463 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 SFSWAPQ12872 951 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ITGADQ13349 1161 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF77Q15935 545 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 DUSP6Q16828 381 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 TMEM215Q68D42 235 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ANKRD34AQ69YU3 496 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 DUS1LQ6P1R4 473 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 CEP68Q76N32 757 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 GALNT10Q86SR1 603 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ATG16L2Q8NAA4 619 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 RIPOR3Q96MK2 946 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 GUCD1Q96NT3 240 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ZSCAN5AQ9BUG6 496 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 RPS6KA6Q9UK32 745 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 VPS4AQ9UN37 437 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 ABCG2Q9UNQ0 655 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 CORO2BQ9UQ03 480 aa6.9□□□□□ -1.3
CTNNA1-244ENST00000627109 KRT87PA6NCN2 255 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 ARHGEF33A8MVX0 844 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 M0R3G1 203 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 TOR1BO14657 336 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 SPINT1O43278 529 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 CYP2A6P11509 494 aaPredicted RBP6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 PPIBP23284 216 aaKnown RBP6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 PSMB9P28065 219 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 KIR3DL1P43629 444 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 CASP9P55211 416 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 FADDQ13158 208 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 TEAD2Q15562 447 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 PTCRAQ6ISU1 281 aaPredicted RBP6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 HSD11B1LQ7Z5J1 315 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 B3GNT8Q7Z7M8 397 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 TSPYL5Q86VY4 417 aaPredicted RBP6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 CCDC71Q8IV32 467 aaPredicted RBP6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 ZDHHC21Q8IVQ6 265 aa6.9□□□□□ -1.31
CTNNA1-244ENST00000627109 KCT2Q8NC54 265 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms