RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PRAMEF17Q5VTA0 474 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 KHDRBS2Q5VWX1 349 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 TLDC1Q6P9B6 456 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 TMPRSS7Q7RTY8 843 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 TMEM126BQ8IUX1 230 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 KCT2Q8NC54 265 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 OR8K5Q8NH50 307 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 PMEPA1Q969W9 287 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 CMTM7Q96FZ5 175 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF285Q96NJ3 590 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 F2RL3Q96RI0 385 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 MS4A8Q9BY19 250 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 ACPTQ9BZG2 426 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 SLC7A5P2Q9GIP4 190 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 REXO4Q9GZR2 422 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 OR51B5Q9H339 312 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 TUBB1Q9H4B7 451 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 KLHL31Q9H511 634 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 BRF2Q9HAW0 419 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 FBXO8Q9NRD0 319 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 FGFR1OP2Q9NVK5 253 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 SLC12A4Q9UP95 1085 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 DCHS1Q96JQ0 3298 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 PTPRZ1P23471 2315 aaPredicted RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 SCN3AQ9NY46 2000 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 HYKKA2RU49 373 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 FITM1A5D6W6 292 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 LRIT2A6NDA9 550 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 URADA6NGE7 173 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 C4orf51C9J302 202 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 SLCO1B7G3V0H7 640 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 H3BMH7 237 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 SLC28A1O00337 649 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 HDAC3O15379 428 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF749O43361 778 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 ERI3O43414 337 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 RGS14O43566 566 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TIAF1O95411 115 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TBX6O95947 436 aaPredicted RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 SERPINA6P08185 405 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF888P0CJ79 500 aaPredicted RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 HSD3B1P14060 373 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 HSD3B2P26439 372 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 LSP1P33241 339 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 HK2P52789 917 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 PLA2G16P53816 162 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 RAB15P59190 212 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 RAB8AP61006 207 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 GABREP78334 506 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 BTKQ06187 659 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF33BQ06732 778 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 PRTGQ2VWP7 1150 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 SPDYAQ5MJ70 313 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 MANEAQ5SRI9 462 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 DCAF12Q5T6F0 453 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 VWA5B1Q5TIE3 1220 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 PWWP2BQ6NUJ5 590 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TRIM40Q6P9F5 258 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 CEACAM20Q6UY09 585 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 RNF165Q6ZSG1 346 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TTLL10Q6ZVT0 673 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 ABHD13Q7L211 337 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 BPHLQ86WA6 291 aaPredicted RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 WDR75Q8IWA0 830 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 LRRC34Q8IZ02 419 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 GBP7Q8N8V2 638 aaPredicted RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 OR2T11Q8NH01 316 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 UTP15Q8TED0 518 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 MS4A6EQ96DS6 147 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 CLIP3Q96DZ5 547 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 C19orf60Q96EN9 201 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 THOC1Q96FV9 657 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 CHMP6Q96FZ7 201 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 C10orf90Q96M02 699 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 TAAR9Q96RI9 348 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 SERPINI1Q99574 410 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 C17orf62Q9BQA9 187 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 CENPKQ9BS16 269 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 NDC1Q9BTX1 674 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 MRPL1Q9BYD6 325 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 NUF2Q9BZD4 464 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 AICDAQ9GZX7 198 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 ACTR5Q9H9F9 607 aaPredicted RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 NPHS2Q9NP85 383 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 CUTCQ9NTM9 273 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 PSD3Q9NYI0 1048 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 VTI1BQ9UEU0 232 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 NDOR1Q9UHB4 597 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 PPT2Q9UMR5 302 aa8.1□□□□□ -1.11
SGMS1-211ENST00000626236 MRPS2Q9Y399 296 aaKnown RBP8.1□□□□□ -1.11
SGMS1-211ENST00000626236 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms