RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 SETD2Q9BYW2 2564 aaPredicted RBP3.4□□□□□ -1.86
SEC23A-215ENST00000625395 ITPR2Q14571 2701 aa3.4□□□□□ -1.86
SEC23A-215ENST00000625395 IGLV3-22A0A075B6J6 115 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CASTOR2A6NHX0 329 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 A6NL46 340 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 A8MZ25 164 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 PLK4O00444 970 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 SLC22A2O15244 555 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 PLEKHA8P1O95397 391 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 EML2O95834 649 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 AGR2O95994 175 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CD48P09326 243 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CHMP24386 653 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 TMOD1P28289 359 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 MSH2P43246 934 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CSRP3P50461 194 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 DMC1Q14565 340 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 PSMD5Q16401 504 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 LIN9Q5TKA1 542 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 ZNF497Q6ZNH5 498 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CPLX4Q7Z7G2 160 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 IQCA1Q86XH1 822 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 TICAM1Q8IUC6 712 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 PLD3Q8IV08 490 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CEP97Q8IW35 865 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 MCEMP1Q8IX19 187 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 MINDY1Q8N5J2 469 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 KNL1Q8NG31 2342 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 RPLP0P6Q8NHW5 317 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 ZNF461Q8TAF7 563 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 PRPF31Q8WWY3 499 aaKnown RBP3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CRYGNQ8WXF5 182 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 TMEM143Q96AN5 459 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 CCDC34Q96HJ3 373 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 ZNF599Q96NL3 588 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 OR2A14Q96R47 310 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 SMC6Q96SB8 1091 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
SEC23A-215ENST00000625395 AGPAT5Q9NUQ2 364 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 ANKMY1Q9P2S6 941 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 NENFQ9UMX5 172 aa3.4□□□□□ -1.87
SEC23A-215ENST00000625395 USP9YO00507 2555 aaPredicted RBP3.4□□□□□ -1.87
SEC23A-215ENST00000625395 SPENQ96T58 3664 aaKnown RBP3.4□□□□□ -1.87
SEC23A-215ENST00000625395 COL6A6A6NMZ7 2263 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 TEX13DA0A0J9YY54 714 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 DUXAA6NLW8 204 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ERI2A8K979 691 aaKnown RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 B4E171 279 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 F5H0A9 414 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 J3QR06 171 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 K7EQS6 105 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 PTGESO14684 152 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 B4GALT5O43286 388 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ZBTB43O43298 467 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ARHGEF9O43307 516 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 PLPP2O43688 288 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 HMMRO75330 724 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 PRAMEF12O95522 483 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 APBB3O95704 486 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 SERPINF2P08697 491 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 PCP11498 1178 aaKnown RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ANXA7P20073 488 aaKnown RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 EPHA2P29317 976 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ADSSP30520 456 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 KIF5BP33176 963 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 RDXP35241 583 aaKnown RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 P2RY2P41231 377 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 TSPAN7P41732 249 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 BRCC3P46736 316 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 GALCP54803 685 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ARPP19P56211 112 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 IRX1P78414 480 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 KCNJ10P78508 379 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ROR1Q01973 937 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 SEMG2Q02383 582 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 MEP1AQ16819 746 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 CYP4A22Q5TCH4 519 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 C20orf194Q5TEA3 1177 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ALS2CLQ60I27 953 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 CFAP77Q6ZQR2 320 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 GLRX5Q86SX6 157 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 PLA2G4DQ86XP0 818 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 L3MBTL4Q8NA19 623 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 HJURPQ8NCD3 748 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 DDHD1Q8NEL9 900 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 GSDMBQ8TAX9 411 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 DEPDC1BQ8WUY9 529 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 SLC47A1Q96FL8 570 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 PGAM5Q96HS1 289 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 LINC00479Q96M42 142 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 NUSAP1Q9BXS6 441 aaKnown RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 SLC26A6Q9BXS9 759 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 LINC00597Q9H2U6 94 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 NXF3Q9H4D5 531 aaKnown RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 RNF41Q9H4P4 317 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-215ENST00000625395 FGF22Q9HCT0 170 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 ZDHHC4Q9NPG8 344 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 BARHL2Q9NY43 387 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 MTRRQ9UBK8 725 aa3.39□□□□□ -1.87
SEC23A-215ENST00000625395 KCNJ14Q9UNX9 436 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms