RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 FGF5P12034 268 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 EMP3P54852 163 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 FOXM1Q08050 763 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 CUL3Q13618 768 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 HKDC1Q2TB90 917 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 TLDC1Q6P9B6 456 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 SCIMPQ6UWF3 145 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 PROSER1Q86XN7 944 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 WDR75Q8IWA0 830 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 LRRC34Q8IZ02 419 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 GPR135Q8IZ08 494 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 ARHGEF39Q8N4T4 335 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 CCT6BQ92526 530 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 CHMP6Q96FZ7 201 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 SERPINI1Q99574 410 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 ACPTQ9BZG2 426 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 SPRTNQ9H040 489 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 FGFR1OP2Q9NVK5 253 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 ADAM21Q9UKJ8 722 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 RARRES3Q9UL19 164 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 RUVBL1Q9Y265 456 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 CCL27Q9Y4X3 112 aa18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 MAP1BP46821 2468 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-221ENST00000622702 NPIPB8E9PQR5 432 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 SLC28A1O00337 649 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 SKAP2O75563 359 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 TGFB1P01137 390 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 STATHP02808 62 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 JUNP05412 331 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 ALOX15P16050 662 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 STXBP1P61764 594 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 BTKQ06187 659 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 GRM7Q14831 915 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 PDCD2Q16342 344 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 TMEM35AQ53FP2 167 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 XKR7Q5GH72 579 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 DEPDC1Q5TB30 811 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 GARNL3Q5VVW2 1013 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 KHDRBS2Q5VWX1 349 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 TMEM214Q6NUQ4 689 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 CHSY3Q70JA7 882 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 DDIASQ8IXT1 998 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 C19orf60Q96EN9 201 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 MACROD1Q9BQ69 325 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 AICDAQ9GZX7 198 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 SLC39A1Q9NY26 324 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 PTGDR2Q9Y5Y4 395 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 USH1CQ9Y6N9 552 aa18.88■□□□□ 0.61
PDLIM2-221ENST00000622702 URADA6NGE7 173 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 TRPC5OSA6NMA1 111 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 TAF4O00268 1085 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 ZNF195O14628 629 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 POLR1CO15160 346 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 TLX3O43711 291 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 SEMA3DO95025 777 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 ETHE1O95571 254 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 SLC5A2P31639 672 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 HNRNPH1P31943 449 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 GCGRP47871 477 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 RAB15P59190 212 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 TMEM164Q5U3C3 297 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 Q6ZSR9 355 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 PPP1R3BQ86XI6 285 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 KCT2Q8NC54 265 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 FGF11Q92914 225 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 MS4A6EQ96DS6 147 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 TAAR9Q96RI9 348 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 NUF2Q9BZD4 464 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 REXO4Q9GZR2 422 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 OR51B5Q9H339 312 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 MEAF6Q9HAF1 191 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 PRM3Q9NNZ6 103 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 STARD5Q9NSY2 213 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 NMRK1Q9NWW6 199 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 IRAK4Q9NWZ3 460 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 VPS29Q9UBQ0 182 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 ZMIZ1Q9ULJ6 1067 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 SEC16AO15027 2179 aa18.87■□□□□ 0.61
PDLIM2-221ENST00000622702 ZZEF1O43149 2961 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 LAMA5O15230 3695 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 C9orf172C9J069 976 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 NVLO15381 856 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 RGS14O43566 566 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 LINC00032P0C843 101 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 PRPH2P23942 346 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 ARFIP1P53367 373 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 HMGCS1Q01581 520 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 TOR1AIP1Q5JTV8 583 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 YOD1Q5VVQ6 348 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 MAVSQ7Z434 540 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 TTC29Q8NA56 475 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 SRFBP1Q8NEF9 429 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 OR2L5Q8NG80 312 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 OR2T11Q8NH01 316 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 PMEPA1Q969W9 287 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 GAL3ST3Q96A11 431 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 F2RL3Q96RI0 385 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 SIKE1Q9BRV8 207 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 CENPKQ9BS16 269 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms