RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 LASP1Q14847 261 aaKnown RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 GALNT10Q86SR1 603 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 UBE2J2Q8N2K1 259 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 LILRA3Q8N6C8 439 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 KCNE4Q8WWG9 221 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 FNDC11Q9BVV2 318 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CUTCQ9NTM9 273 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 GIN1Q9NXP7 522 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 DOCK5Q9H7D0 1870 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TLCD2A6NGC4 264 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 PLD2O14939 933 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 PLCXD2Q0VAA5 305 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 AFMIDQ63HM1 303 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TLDC1Q6P9B6 456 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 PAOXQ6QHF9 649 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CCDC81Q6ZN84 652 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 UBE2Q1Q7Z7E8 422 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TRIM69Q86WT6 500 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF781Q8N8C0 355 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 RIN3Q8TB24 985 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CYGBQ8WWM9 190 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 PRRG3Q9BZD7 231 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 ZFR2Q9UPR6 939 aaKnown RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 GPR37L1O60883 481 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 CPNE3O75131 537 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SAGP10523 405 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 GLB1P16278 677 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 EEF1A2Q05639 463 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TRIP10Q15642 601 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 OTUD3Q5T2D3 398 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 GATSQ8NAP1 163 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF527Q8NB42 609 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SLC22A8Q8TCC7 542 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 RIT1Q92963 219 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 OLFM1Q99784 485 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 FAM117AQ9C073 453 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 LYARQ9NX58 379 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 EHD3Q9NZN3 535 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 PRODH2Q9UF12 536 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 MANBAO00462 879 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 PROCP04070 461 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 ACPPP15309 386 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF24P17028 368 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 POLR2JP52435 117 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 DCDP81605 110 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 GPR19Q15760 415 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 HES3Q5TGS1 186 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SPATA19Q7Z5L4 167 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 NRROSQ86YC3 692 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM151BQ8IW70 566 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 CHCHD4Q8N4Q1 142 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TEX26Q8N6G2 289 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 NLGN4YQ8NFZ3 816 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 DCAKDQ8WVC6 231 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SLC25A36Q96CQ1 311 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 DACH2Q96NX9 599 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TCEAL2Q9H3H9 227 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 CCDC86Q9H6F5 360 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 C1GALT1Q9NS00 363 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 COPG1Q9Y678 874 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TRPM6Q9BX84 2022 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 AGPSO00116 658 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 BRINP1O60477 761 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SLC26A3P40879 764 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 PYCR3Q53H96 274 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 IER5LQ5T953 404 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 MANEALQ5VSG8 457 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 OTUD1Q5VV17 481 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 PRMT9Q6P2P2 845 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 GUSBP11Q6P575 273 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 RTL4Q6ZR62 310 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 CPSF7Q8N684 471 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 C19orf47Q8N9M1 422 aaKnown RBP8.72□□□□□ -1.01
HDAC9-229ENST00000622668 OR9A4Q8NGU2 314 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TCTN2Q96GX1 697 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 FER1L6-AS2Q96M78 137 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 KCNA7Q96RP8 456 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SIKE1Q9BRV8 207 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 SLC12A9Q9BXP2 914 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 LRRC3Q9BY71 257 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TAS2R9Q9NYW1 312 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 TRPS1Q9UHF7 1281 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 OARD1Q9Y530 152 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 PCDHGA5Q9Y5G8 931 aa8.72□□□□□ -1.01
HDAC9-229ENST00000622668 CCDC187A0A096LP49 1063 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 TNFSF14O43557 240 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 ABOP16442 354 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 PRPS1L1P21108 318 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 TNFRSF8P28908 595 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 INPP1P49441 399 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 KCNAB1Q14722 419 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 SAMD4BQ5PRF9 694 aaKnown RBP8.71□□□□□ -1.01
HDAC9-229ENST00000622668 PRICKLE2Q7Z3G6 844 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 OR4K1Q8NGD4 311 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 PHF10Q8WUB8 498 aaKnown RBP8.71□□□□□ -1.01
HDAC9-229ENST00000622668 NXPE2Q96DL1 559 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 GABRG3Q99928 467 aa8.71□□□□□ -1.01
HDAC9-229ENST00000622668 ARNT2Q9HBZ2 717 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms