RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 STX1BP61266 288 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 STXBP1P61764 594 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 HYAL2Q12891 473 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 KCNAB1Q14722 419 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 RPS6KA2Q15349 733 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 TMEM35AQ53FP2 167 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 CCDC157Q569K6 752 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 ASCL5Q7RTU5 278 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 COMMD6Q7Z4G1 85 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 METTL4Q8N3J2 472 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 ZNF655Q8N720 491 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 CSNK1A1LQ8N752 337 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 KLHL6Q8WZ60 621 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 N4BP2L2Q92802 583 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 RGMAQ96B86 450 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 SLC41A2Q96JW4 573 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 CCDC74BQ96LY2 380 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 EBPLQ9BY08 206 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 SLC6A16Q9GZN6 736 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 AICDAQ9GZX7 198 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 ZNF768Q9H5H4 540 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 PDP2Q9P2J9 529 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 PLCL2Q9UPR0 1127 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 RUVBL1Q9Y265 456 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 ZFHX2Q9C0A1 2572 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 SCN3AQ9NY46 2000 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 PLPP1O14494 284 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 THRAP10827 490 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 NELFEP18615 380 aaKnown RBP16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 SQLEQ14534 574 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 GSTA3Q16772 222 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 HKDC1Q2TB90 917 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 ADPRMQ3LIE5 342 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 TMTC4Q5T4D3 741 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 NOXRED1Q6NXP6 359 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 CLNKQ7Z7G1 428 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 LIX1Q8N485 282 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 KCT2Q8NC54 265 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 WDR48Q8TAF3 677 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 MS4A6EQ96DS6 147 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 SORBS1Q9BX66 1292 aaKnown RBP16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 NLNQ9BYT8 704 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 ZNF385DQ9H6B1 395 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 DLGAP4Q9Y2H0 992 aa16.98■□□□□ 0.31
PTCHD3-202ENST00000622555 PCNX2A6NKB5 2137 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 CFAP73A6NFT4 308 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 RTCAO00442 366 aaKnown RBP16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 ERI3O43414 337 aaKnown RBP16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 SRPX2O60687 465 aaPredicted RBP16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 ANKRD34CP0C6C1 535 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 G6PDP11413 515 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 BCKDHAP12694 445 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 GABRA4P48169 554 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 PLA2G16P53816 162 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 NME5P56597 212 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 NHLH1Q02575 133 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 WASHC2DQ5SRD0 308 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 PHF19Q5T6S3 580 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 DGLUCYQ7Z3D6 616 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 ARHGAP22Q7Z5H3 698 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 PIP4P1Q86T03 277 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 PARP9Q8IXQ6 854 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 D2HGDHQ8N465 521 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 CPSF7Q8N684 471 aaKnown RBP16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 C17orf62Q9BQA9 187 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 STARD5Q9NSY2 213 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 IRAK4Q9NWZ3 460 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 ASIC5Q9NY37 505 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 GPR45Q9Y5Y3 372 aa16.97■□□□□ 0.31
PTCHD3-202ENST00000622555 A0A0G2JN53 185 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 PCDH7O60245 1069 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 KLK1P06870 262 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 ACPPP15309 386 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 TIA1P31483 386 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 ATP4BP51164 291 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 RAE1P78406 368 aaKnown RBP16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 TGM3Q08188 693 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 TRIM40Q6P9F5 258 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 CYP20A1Q6UW02 462 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 ASRGL1Q7L266 308 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 UBE3DQ7Z6J8 389 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 PACS2Q86VP3 889 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 MIER2Q8N344 545 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 RCBTB1Q8NDN9 531 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 SRFBP1Q8NEF9 429 aaKnown RBP16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 OR2L5Q8NG80 312 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 ZCCHC10Q8TBK6 192 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 GAL3ST3Q96A11 431 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 C11orf24Q96F05 449 aaPredicted RBP16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 FCRL1Q96LA6 429 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 BRINP2Q9C0B6 783 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 MRGBPQ9NV56 204 aa16.96■□□□□ 0.31
PTCHD3-202ENST00000622555 GNG14A0A1W2PPG7 69 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 URADA6NGE7 173 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 C4orf51C9J302 202 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 TXNDC9O14530 226 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 ZSCAN9O15535 394 aaPredicted RBP16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 RFPL3O75679 317 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 GBAP04062 536 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms