RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 EFNA1P20827 205 aaPredicted RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 CTNNB1P35222 781 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 BMXP51813 675 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 ST8SIA6P61647 398 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 MVKQ03426 396 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 RBBP4Q09028 425 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 NPRL3Q12980 569 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 CAMK1Q14012 370 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 SPCS2Q15005 226 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 MPEG1Q2M385 716 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 GAB4Q2WGN9 574 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 HNRNPA1L2Q32P51 320 aaKnown RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 SYT6Q5T7P8 510 aaPredicted RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 FAM71E1Q6IPT2 247 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 CRTC3Q6UUV7 619 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 NXPE4Q6UWF7 544 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 UNC5DQ6UXZ4 953 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 IKBIPQ70UQ0 350 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 OR52N2Q8NGI0 321 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 OR2L2Q8NH16 312 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 SETD7Q8WTS6 366 aaKnown RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 SLC5A11Q8WWX8 675 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 ARRDC3Q96B67 414 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 YIPF6Q96EC8 236 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 HRASLS5Q96KN8 279 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 DGCR6LQ9BY27 220 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 OR2AG1Q9H205 316 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 CCNB1IP1Q9NPC3 277 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 TBC1D23Q9NUY8 699 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 NDUFAF4Q9P032 175 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 A8MVJ9 347 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 PRRT4C9JH25 899 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 GPR37L1O60883 481 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 CYP4B1P13584 511 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 C6P13671 934 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 EPHA2P29317 976 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 MLLT10P55197 1068 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 CSNK2BP67870 215 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 FADDQ13158 208 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 NPTX1Q15818 432 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 TMEM52BQ4KMG9 183 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 COX20Q5RI15 118 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 C11orf96Q7Z7L8 435 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 TRIM74Q86UV6 250 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 TRAPPC5Q8IUR0 188 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 OR4C15Q8NGM1 316 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 C16orf78Q8WTQ4 265 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 TRUB1Q8WWH5 349 aaKnown RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 RSPRY1Q96DX4 576 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 TPD52L3Q96J77 140 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 THSD1Q9NS62 852 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 CXXC1Q9P0U4 656 aaPredicted RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 KIF17Q9P2E2 1029 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 ERVK-18Q9QC07 812 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 COQ6Q9Y2Z9 468 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 COL4A3Q01955 1670 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 EDDM13A0A1B0GTR0 161 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 VEGFDO43915 354 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ADRB3P13945 408 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ZNF12P17014 697 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PTX3P26022 381 aaPredicted RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 FMO3P31513 532 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 MAPK10P53779 464 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 RPP38P78345 283 aaKnown RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 CAMK2GQ13555 558 aaPredicted RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 ELAVL3Q14576 367 aaKnown RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 ANKDD1AQ495B1 522 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 MLIPQ5VWP3 458 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ZNF852Q6ZMS4 543 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ERN2Q76MJ5 926 aaKnown RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 PRSS48Q7RTY5 328 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 OXR1Q8N573 874 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ATG16L2Q8NAA4 619 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 APH1BQ8WW43 257 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 IPCEF1Q8WWN9 437 aaPredicted RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 ING5Q8WYH8 240 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 UBE2E3Q969T4 207 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PLEKHA8Q96JA3 519 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ZNF347Q96SE7 839 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ZDHHC5Q9C0B5 715 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 CCDC177Q9NQR7 707 aaPredicted RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 NECTIN3Q9NQS3 549 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 C1GALT1Q9NS00 363 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SCN3BQ9NY72 215 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SH3BP4Q9P0V3 963 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 WARS2Q9UGM6 360 aaKnown RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 B3GNT3Q9Y2A9 372 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 LYVE1Q9Y5Y7 322 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 C5orf67F2Z3F1 127 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 AXIN1O15169 862 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ADAMDEC1O15204 470 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SLC22A1O15245 554 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PCDHGA12O60330 932 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SH3BGRLO75368 114 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 FGBP02675 491 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ERGP11308 486 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms