RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CCNCP24863 283 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ALDH1B1P30837 517 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ETV5P41161 510 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CLDN15P56746 228 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 SLC26A5P58743 744 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 STARD6P59095 220 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ACTN3Q08043 901 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 DMTNQ08495 405 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 AIMP1Q12904 312 aaKnown RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 TRA2AQ13595 282 aaKnown RBP eCLIP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 MORF4L2Q15014 288 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 FAM189A2Q15884 450 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CEP55Q53EZ4 464 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 BMP2KLQ5H9B9 411 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 SLC25A30Q5SVS4 291 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 GARNL3Q5VVW2 1013 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 NOTUMQ6P988 496 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 PIWIL3Q7Z3Z3 882 aaKnown RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 GLRX5Q86SX6 157 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ZFAND4Q86XD8 727 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 HPS6Q86YV9 775 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ABHD12Q8N2K0 398 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 C10orf53Q8N6V4 93 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 TC2NQ8N9U0 490 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ZBTB44Q8NCP5 570 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 DEPDC1BQ8WUY9 529 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 PIK3R3Q92569 461 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ATP6V0A1Q93050 837 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ITFG2Q969R8 447 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 PDLIM5Q96HC4 596 aaKnown RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 LINC00615Q96LM1 132 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 TMEM237Q96Q45 408 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 FEVQ99581 238 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CRACR2AQ9BSW2 395 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 PRRG4Q9BZD6 226 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 PUS3Q9BZE2 481 aaKnown RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 C1orf21Q9H246 121 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 NCOR1P1Q9H4R4 102 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 SUDS3Q9H7L9 328 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 VPS37BQ9H9H4 285 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CDH20Q9HBT6 801 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 C6orf203Q9P0P8 240 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CTSZQ9UBR2 303 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 IL17BQ9UHF5 180 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ANAPC2Q9UJX6 822 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 RARRES3Q9UL19 164 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CCL27Q9Y4X3 112 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 GON4LQ3T8J9 2241 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 C2CD4DB7Z1M9 353 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 BCL2L11O43521 198 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 NOL3O60936 208 aaKnown RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 TSC22D2O75157 780 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 BAG3O95817 575 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 HEXBP07686 556 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 GZMAP12544 262 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 ITIH1P19827 911 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 AZGP1P25311 298 aaKnown RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 PBLDP30039 288 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 CCR3P51677 355 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 CLCN4P51793 760 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 PPP5CP53041 499 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 SLC12A3P55017 1021 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 HTD2P86397 168 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 ZFP36L1Q07352 338 aaKnown RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 NPTX1Q15818 432 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 LETM2Q2VYF4 491 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 TOR1AIP1Q5JTV8 583 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 ANKRD20A12PQ8NF67 263 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 C9orf43Q8TAL5 461 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 GRK7Q8WTQ7 553 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 CTNNBL1Q8WYA6 563 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 KRT35Q92764 455 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 CNDP1Q96KN2 507 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 AK8Q96MA6 479 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 RUNDC3BQ96NL0 473 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 MUS81Q96NY9 551 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 LGMNQ99538 433 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 SPXQ9BT56 116 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 APOL6Q9BWW8 343 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 ZMAT5Q9UDW3 170 aaKnown RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 HOOK1Q9UJC3 728 aaKnown RBP3.5□□□□□ -1.85
BRCA1-229ENST00000621897 TRPV2Q9Y5S1 764 aa3.5□□□□□ -1.85
BRCA1-229ENST00000621897 SPAG9O60271 1321 aaKnown RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 KRT87PA6NCN2 255 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 A8MXK9 166 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 UBXN8O00124 270 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 AP3B1O00203 1094 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 CACNB4O00305 520 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 SNAP91O60641 907 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 KINO60870 393 aaKnown RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 FOLR2P14207 255 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 ELAVL4P26378 380 aaKnown RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 STIP1P31948 543 aaKnown RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 ASMTP46597 345 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 ARFIP1P53367 373 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 C17orf67Q0P5P2 114 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 RASGEF1BQ0VAM2 473 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 PEX6Q13608 980 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 KBTBD12Q3ZCT8 623 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms