RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ST6GAL2Q96JF0 529 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 CRNNQ9UBG3 495 aaPredicted RBP18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 A8MVJ9 347 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 SEMA3DO95025 777 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 MFN2O95140 757 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 IRF8Q02556 426 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 ACSM2AQ08AH3 577 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 DDX39BQ13838 428 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 ATP13A5Q4VNC0 1218 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 ACSM2BQ68CK6 577 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 C17orf99Q6UX52 265 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 NLRP8Q86W28 1048 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 GATAD2AQ86YP4 633 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 RAVER1Q8IY67 606 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 DCAF4L2Q8NA75 395 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 SETD6Q8TBK2 473 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 MAGEB10Q96LZ2 347 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 MCCC1Q96RQ3 725 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 TSEN34Q9BSV6 310 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 C2orf78A6NCI8 922 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 EFCAB10A6NFE3 127 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 GFYI3L273 518 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 HMGA1P17096 107 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 RFX2P48378 723 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 SLC11A1P49279 550 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 MVDP53602 400 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 NKX3-2P78367 333 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 DMC1Q14565 340 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 COX20Q5RI15 118 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 LIPJQ5W064 366 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 RGMBQ6NW40 437 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 CAMKMTQ7Z624 323 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 APCDD1Q8J025 514 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 ST13P5Q8NFI4 369 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 TRNT1Q96Q11 434 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 C3orf14Q9HBI5 128 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 DDX28Q9NUL7 540 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 GPATCH2Q9NW75 528 aa18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 CNOT2Q9NZN8 540 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-212ENST00000620787 HELZP42694 1942 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 J3KTA2 159 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 SCO2O43819 266 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 GUCY1B2O75343 617 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 MPC1LP0DKB6 136 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 CD72P21854 359 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 IDSP22304 550 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 CTGFP29279 349 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 GATMP50440 423 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 FKBP1BP68106 108 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 TRAF7Q6Q0C0 670 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 CRTC1Q6UUV9 634 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 RFLNAQ6ZTI6 216 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 BBS7Q8IWZ6 715 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 THSD1Q9NS62 852 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 TAS2R9Q9NYW1 312 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 IGLV3-16A0A075B6K0 115 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 NT5C1B-RDH14C9J2C7 533 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 H7C4K7 107 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 SOCS5O75159 536 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 UGT2B17O75795 530 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ETHE1O95571 254 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 OR56A5P0C7T3 313 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 CKBP12277 381 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ETFAP13804 333 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 POU2F1P14859 743 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 CASP9P55211 416 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF33BQ06732 778 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 SP140Q13342 867 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 PTGES3Q15185 160 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF852Q6ZMS4 543 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF517Q6ZMY9 492 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ASCC1Q8N9N2 400 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 OR4A15Q8NGL6 344 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 OPALINQ96PE5 141 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 BARHL1Q9BZE3 327 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 ASAH2Q9NR71 780 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 STOML2Q9UJZ1 356 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 GABRQQ9UN88 632 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 PCDHGB2Q9Y5G2 931 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 V9GYH0 126 aa18.81■□□□□ 0.6
PDLIM3-212ENST00000620787 SH3D21A4FU49 640 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 CENPBD1B2RD01 187 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 PCDH17O14917 1159 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 UGDHO60701 494 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 CYP2A7P20853 494 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 DDOSTP39656 456 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 DMPKQ09013 629 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 ZFP69Q49AA0 526 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 XKR6Q5GH73 641 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 ANXA8L1Q5VT79 327 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 TMEM173Q86WV6 379 aaPredicted RBP18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 RNF130Q86XS8 419 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 WDR36Q8NI36 951 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 ASB15Q8WXK1 588 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 BHMTQ93088 406 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 FAM129BQ96TA1 746 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF556Q9HAH1 456 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 DYRK4Q9NR20 520 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 TRPM5Q9NZQ8 1165 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 FTSJ1Q9UET6 329 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms