RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MAGEB10Q96LZ2 347 aaPredicted RBP16.17■□□□□ 0.18
HMGN3-203ENST00000620514 OR1F2PQ96R84 312 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 GPR22Q99680 433 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 RBBP8Q99708 897 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 CPNE1Q99829 537 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 SLC6A16Q9GZN6 736 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 AICDAQ9GZX7 198 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 ERRFI1Q9UJM3 462 aaPredicted RBP16.17■□□□□ 0.18
HMGN3-203ENST00000620514 KCNE2Q9Y6J6 123 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 ICE1Q9Y2F5 2266 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 A8MUI8 341 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 TAPBPO15533 448 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 FAM155BO75949 473 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 FHP07954 510 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CCDC166P0CW27 439 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 GP5P40197 560 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 AGTR2P50052 363 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 HNMTP50135 292 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 ABRAXAS2Q15018 415 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 TGFBIQ15582 683 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 NSDHLQ15738 373 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 SFT2D3Q587I9 215 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 FCRLBQ6BAA4 426 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 PLAG1Q6DJT9 500 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 SLCO4C1Q6ZQN7 724 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CYS1Q717R9 158 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CCDC25Q86WR0 208 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CTAGE3PQ8IX95 158 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 KLHDC8AQ8IYD2 350 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 ST6GALNAC3Q8NDV1 305 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 PLPP5Q8NEB5 264 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CREB3L4Q8TEY5 395 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 FAR1Q8WVX9 515 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 TSPAN17Q96FV3 270 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 TMEM79Q9BSE2 394 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGN3-203ENST00000620514 TXNDC16Q9P2K2 825 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 UTP11Q9Y3A2 253 aaKnown RBP16.16■□□□□ 0.18
HMGN3-203ENST00000620514 CPAMD8Q8IZJ3 1885 aa16.16■□□□□ 0.18
HMGN3-203ENST00000620514 TRAV17A0A0B4J275 112 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 MAGEB17A8MXT2 336 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 B4GALT2O60909 372 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 UTP20O75691 2785 aaKnown RBP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 GSTA2P09210 222 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 SMIM10L1P0DMW3 83 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 C1GALT1C1LP0DN25 315 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 CD1DP15813 335 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 IL10P22301 178 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 ST13P50502 369 aaKnown RBP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 AP2B1P63010 937 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 ZNF33BQ06732 778 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 ELOAQ14241 798 aaKnown RBP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 OR4D1Q15615 310 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 KBTBD12Q3ZCT8 623 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 TOR1AIP1Q5JTV8 583 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 ABHD17BQ5VST6 288 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 RPUSD3Q6P087 351 aaKnown RBP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 PAPD4Q6PIY7 484 aaKnown RBP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 ABHD13Q7L211 337 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 TRPV3Q8NET8 790 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 ESAMQ96AP7 390 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 TBC1D20Q96BZ9 403 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 SMIM10Q96HG1 83 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 TAAR6Q96RI8 345 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 SCN2AQ99250 2005 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 RAB17Q9H0T7 212 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 STMN3Q9NZ72 180 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 SPTBN1Q01082 2364 aaKnown RBP16.15■□□□□ 0.18
HMGN3-203ENST00000620514 MAST4O15021 2626 aa16.15■□□□□ 0.18
HMGN3-203ENST00000620514 A1L4Q6 167 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 PRAMEF4O60810 478 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 STMN1P16949 149 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 GNAZP19086 355 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 MAGEA4P43358 317 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 BTG2P78543 158 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 SLC7A5Q01650 507 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 SRSF11Q05519 484 aaKnown RBP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 ACTN3Q08043 901 aaPredicted RBP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 ILF2Q12905 390 aaKnown RBP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 SLBPQ14493 270 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 EFTUD2Q15029 972 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 ZKSCAN8Q15776 578 aaPredicted RBP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 PRAMEF9Q5VWM5 478 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 FAM180AQ6UWF9 173 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 ZNF572Q7Z3I7 529 aaPredicted RBP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 GPSM1Q86YR5 675 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 PPM1NQ8N819 430 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 FBF1Q8TES7 1133 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 NPAS2Q99743 824 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 RNF32Q9H0A6 362 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 RHBGQ9H310 441 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 KCNK13Q9HB14 408 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 WWOXQ9NZC7 414 aa16.14■□□□□ 0.17
HMGN3-203ENST00000620514 PLEKHB1Q9UF11 243 aaPredicted RBP16.14■□□□□ 0.17
HMGN3-203ENST00000620514 ESYT3A0FGR9 886 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 FAM227AF5H4B4 570 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 MAN1A2O60476 641 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 DDAH2O95865 285 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 LDLRP01130 860 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms