RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 VPS54Q9P1Q0 977 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 ATP6V1HQ9UI12 483 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 FZD10Q9ULW2 581 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 PCDHA7Q9UN72 937 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 STUB1Q9UNE7 303 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 MRPS7Q9Y2R9 242 aaKnown RBP4.65□□□□□ -1.67
RFC3-203ENST00000616236 ATG4BQ9Y4P1 393 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 PTGDR2Q9Y5Y4 395 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 NSD2O96028 1365 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 NPC1L1Q9UHC9 1359 aa4.65□□□□□ -1.67
RFC3-203ENST00000616236 LINC01553A4QN01 128 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ANKRD61A6NGH8 418 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ANKRD30BLA7E2S9 258 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 INAFM1C9JVW0 142 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 K7EQM0 130 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 SYT7O43581 403 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 SLC28A2O43868 658 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 TBX19O60806 448 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 EPOP01588 193 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 HMBSP08397 361 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 IQCF3P0C7M6 154 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 RRASP10301 218 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ODC1P11926 461 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 KRT3P12035 628 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 CD59P13987 128 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 EZRP15311 586 aaKnown RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 RPA2P15927 270 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 PPP2R1AP30153 589 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 FCGR2BP31994 310 aaPredicted RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 ADRA1AP35348 466 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 NUMBP49757 651 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 CLCN4P51793 760 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ABATP80404 500 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 SRSF1Q07955 248 aaKnown RBP eCLIP4.64□□□□□ -1.67
RFC3-203ENST00000616236 ZMYND11Q15326 602 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 PDK4Q16654 411 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 AGKQ53H12 422 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ARHGAP17Q68EM7 881 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 TRNP1Q6NT89 227 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 CCBE1Q6UXH8 406 aaPredicted RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 GFRALQ6UXV0 394 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 YTHDF3Q7Z739 585 aaKnown RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 EID3Q8N140 333 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 FAM98AQ8NCA5 519 aaKnown RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 OR13C2Q8NGS9 318 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 OLIG1Q8TAK6 271 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 AZIN2Q96A70 460 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 PSKH2Q96QS6 385 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 OR1F2PQ96R84 312 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ZNF607Q96SK3 696 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 CCT7Q99832 543 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 CBWD1Q9BRT8 395 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 NACA2Q9H009 215 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 R3HDMLQ9H3Y0 253 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 RAVER2Q9HCJ3 691 aaKnown RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 SLC12A6Q9UHW9 1150 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 ERVK-19Q9WJR5 959 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 MRPS2Q9Y399 296 aaKnown RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 MAB21L2Q9Y586 359 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 INSL5Q9Y5Q6 135 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 DDX49Q9Y6V7 483 aaKnown RBP4.64□□□□□ -1.67
RFC3-203ENST00000616236 IL16Q14005 1332 aa4.64□□□□□ -1.67
RFC3-203ENST00000616236 XKRY2A2RUG3 117 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 ZSCAN5BA6NJL1 495 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 C2orf81A6NN90 581 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 TMEM110-MUSTN1A8MSY1 372 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 CLN5O75503 358 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 RHOBTB1O94844 696 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 CPNE6O95741 557 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 APOHP02749 345 aaPredicted RBP4.63□□□□□ -1.67
RFC3-203ENST00000616236 CA3P07451 260 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 ITGB6P18564 788 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 CDH3P22223 829 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 PAX7P23759 505 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 IL4RP24394 825 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 AHRP35869 848 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 OR3A3P47888 321 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 NR2C2P49116 596 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 MLLT10P55197 1068 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 B3GALT5-AS1P59052 145 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 SEC61A1P61619 476 aaKnown RBP4.63□□□□□ -1.67
RFC3-203ENST00000616236 DDX39BQ13838 428 aaKnown RBP4.63□□□□□ -1.67
RFC3-203ENST00000616236 OPCMLQ14982 345 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 PRTGQ2VWP7 1150 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 FAM122CQ6P4D5 195 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 FAM171BQ6P995 826 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 CDHR3Q6ZTQ4 885 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 PIWIL4Q7Z3Z4 852 aaKnown RBP4.63□□□□□ -1.67
RFC3-203ENST00000616236 PIP4P1Q86T03 277 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 TMEM219Q86XT9 240 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 TMEM99Q8N816 258 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 LRTM2Q8N967 370 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 SMRP1Q8NCR6 262 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 PRSS3P2Q8NHM4 247 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 GRHL3Q8TE85 626 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 CHPT1Q8WUD6 406 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 PHYHIPQ92561 330 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms