RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 KIF2BQ8N4N8 673 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 GPATCH11Q8N954 259 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 TMEM178AQ8NBL3 297 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 ELP5Q8TE02 316 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 THAP3Q8WTV1 239 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 FBXL8Q96CD0 374 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 MAGED4Q96JG8 741 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 FRMD6Q96NE9 622 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 CDCP1Q9H5V8 836 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 RUBCNLQ9H714 662 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 PLAC1Q9HBJ0 212 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 ASIC3Q9UHC3 531 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 IKZF3Q9UKT9 509 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 NRDCO43847 1150 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 NEURL1O76050 574 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 GUCA1CO95843 209 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZNF888P0CJ79 500 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 TAS2R50P59544 299 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 BBS9Q3SYG4 887 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 TEDDM1Q5T9Z0 273 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZNF468Q5VIY5 522 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 STRA8Q7Z7C7 330 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 LGI4Q8N135 537 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 SLC35F6Q8N357 371 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 NT5CQ8TCD5 201 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 SLC5A11Q8WWX8 675 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 NEIL2Q969S2 332 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 OLFM1Q99784 485 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 NAT9Q9BTE0 207 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 TRIM54Q9BYV2 358 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 PPANQ9NQ55 473 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZFP69BQ9UJL9 534 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZNF835Q9Y2P0 537 aa19.5■□□□□ 0.71
TRAPPC3-208ENST00000616074 PKDREJQ9NTG1 2253 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 AKAP9Q99996 3911 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 CTAGE15A4D2H0 777 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 NPIPA5E9PKD4 350 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 NDC80O14777 642 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 B4GALT2O60909 372 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 SP1P08047 785 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 SNRPB2P08579 225 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 JAK1P23458 1154 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 SCTRP47872 440 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 SKP1P63208 163 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 RGS1Q08116 209 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 KRTCAP3Q53RY4 240 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 ABHD13Q7L211 337 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 CTAGE6Q86UF2 777 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 TBC1D19Q8N5T2 526 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 UTP15Q8TED0 518 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 ATL1Q8WXF7 558 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 TSNARE1Q96NA8 513 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 DDX47Q9H0S4 455 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 CHST11Q9NPF2 352 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 LRFN1Q9P244 771 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 NPIPA1Q9UND3 350 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 VWA7Q9Y334 891 aa19.49■□□□□ 0.71
TRAPPC3-208ENST00000616074 TACC2O95359 2948 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 MLYCDO95822 493 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 ENO2P09104 434 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 ESRRAP11474 423 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 ELAVL4P26378 380 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 TPP2P29144 1249 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 BTG2P78543 158 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 REEP5Q00765 189 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 CSHL1Q14406 222 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 HP1BP3Q5SSJ5 553 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 SLC25A25Q6KCM7 469 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 FAM45BPQ6NSW5 357 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 NIPAL1Q6NVV3 410 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 TRMT10BQ6PF06 316 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 XKRXQ6PP77 449 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 SBSNQ6UWP8 590 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 Q6ZPB1 254 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 QSOX2Q6ZRP7 698 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 RPS19BP1Q86WX3 136 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 SPPL2CQ8IUH8 684 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 SIAH3Q8IW03 269 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 HORMAD2Q8N7B1 307 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 ANKRD53Q8N9V6 530 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 FAM45AQ8TCE6 357 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 CFAP36Q96G28 342 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 PTCHD1Q96NR3 888 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 CORO1CQ9ULV4 474 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 GTF3C1Q12789 2109 aa19.48■□□□□ 0.71
TRAPPC3-208ENST00000616074 TEP1Q99973 2627 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZNHIT1O43257 154 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 PTGER4P35408 488 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 AHRP35869 848 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 HNF4AP41235 474 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 RAB8AP61006 207 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 HYAL2Q12891 473 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 CDSNQ15517 529 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 PPP1R3AQ16821 1122 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 GDF7Q7Z4P5 450 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 CYP4X1Q8N118 509 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 FAM98AQ8NCA5 519 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 ADAMTS18Q8TE60 1221 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 PWWP2AQ96N64 755 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms