RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 FRG2Q64ET8 278 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 SNX20Q7Z614 316 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 MSRB3Q8IXL7 192 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 FRG2BQ96QU4 278 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 NIPSNAP1Q9BPW8 284 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 TMED9Q9BVK6 235 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 DNAJC11Q9NVH1 559 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 RIMKLBQ9ULI2 386 aa11.37□□□□□ -0.59
CDH5-208ENST00000614547 DOCK3Q8IZD9 2030 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PRR23D1E9PI22 279 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 ACSL4O60488 711 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PRAMEF12O95522 483 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 TGFB1P01137 390 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PRR23D2P0DMB1 279 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 NR2F6P10588 404 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CSTF1Q05048 431 aaKnown RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 CBLBQ13191 982 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ERICH5Q6P6B1 374 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 USP45Q70EL2 814 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 LAPTM4BQ86VI4 370 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 BEND7Q8N7W2 519 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 RAB8BQ92930 207 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CPPED1Q9BRF8 314 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 CHIAQ9BZP6 476 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 POPDC3Q9HBV1 291 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CLEC2DQ9UHP7 191 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CMAHPQ9Y471 501 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CACNA1CQ13936 2221 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 A0A0G2JN53 185 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 TRBC2A0A5B9 178 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CENPBD1B2RD01 187 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ARHGAP33O14559 1287 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PCDH17O14917 1159 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 NUPL2O15504 423 aaKnown RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 CDK1P06493 297 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ITGAMP11215 1152 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PRKCAP17252 672 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PTGS2P35354 604 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 HTR3AP46098 478 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 MEF2AQ02078 507 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 PRKCZQ05513 592 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 E2F2Q14209 437 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 SLC46A3Q7Z3Q1 461 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PHC2Q8IXK0 858 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 LRRC17Q8N6Y2 441 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ARMC5Q96C12 935 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 TBX5Q99593 518 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CLEC4MQ9H2X3 399 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 H2AFY2Q9P0M6 372 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 PTGFRNQ9P2B2 879 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CLDN24A6NM45 220 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 TLR4O00206 839 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 OR56A5P0C7T3 313 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ANXA8P13928 327 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 TALDO1P37837 337 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 RECQLP46063 649 aaPredicted RBP11.36□□□□□ -0.59
CDH5-208ENST00000614547 SCARB2Q14108 478 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 KEAP1Q14145 624 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 CDK10Q15131 360 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 BAK1Q16611 211 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 B3GLCTQ6Y288 498 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 DNAJC22Q8N4W6 341 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ATP6V1C2Q8NEY4 427 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ZDHHC6Q9H6R6 413 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 ZNF639Q9UID6 485 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 OSGIN1Q9UJX0 560 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 PCDHB1Q9Y5F3 818 aa11.36□□□□□ -0.59
CDH5-208ENST00000614547 LOC102723532A0A0G2JNH3 316 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 M0R082 166 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 SSNA1O43805 119 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 PCDH7O60245 1069 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 GJB5O95377 273 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 C6orf47O95873 294 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 IFNW1P05000 195 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 CSTF2P33240 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDH5-208ENST00000614547 CLDN8P56748 225 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 RPL6Q02878 288 aaKnown RBP11.35□□□□□ -0.59
CDH5-208ENST00000614547 SPHARQ15513 63 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 ATAT1Q5SQI0 421 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 KCNN1Q92952 543 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 RTP3Q9BQQ7 232 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 SLC35A5Q9BS91 424 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 FAM83DQ9H4H8 585 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 SERHL2Q9H4I8 314 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 BRD9Q9H8M2 597 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 SERHLQ9NQF3 203 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 A8MUA0 341 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 WBP4O75554 376 aaKnown RBP11.35□□□□□ -0.59
CDH5-208ENST00000614547 CKMP06732 381 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 IGFBP1P08833 259 aaPredicted RBP11.35□□□□□ -0.59
CDH5-208ENST00000614547 PRPS1L1P21108 318 aa11.35□□□□□ -0.59
CDH5-208ENST00000614547 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
CDH5-208ENST00000614547 RPL34P49207 117 aaKnown RBP11.35□□□□□ -0.59
CDH5-208ENST00000614547 ZNF140P52738 457 aaPredicted RBP11.35□□□□□ -0.59
CDH5-208ENST00000614547 TIAL1Q01085 375 aaKnown RBP eCLIP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms