RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 STARD3Q14849 445 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 DGUOKQ16854 277 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 GPR153Q6NV75 609 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 PRSS48Q7RTY5 328 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 EGFL6Q8IUX8 553 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 P3H2Q8IVL5 708 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 IPCEF1Q8WWN9 437 aaPredicted RBP16.56■□□□□ 0.24
NEK3-206ENST00000611833 PITX2Q99697 317 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 ATAD3AQ9NVI7 634 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 AP1M2Q9Y6Q5 423 aa16.56■□□□□ 0.24
NEK3-206ENST00000611833 KPNA3O00505 521 aaPredicted RBP16.55■□□□□ 0.24
NEK3-206ENST00000611833 MRPS14O60783 128 aaKnown RBP16.55■□□□□ 0.24
NEK3-206ENST00000611833 OPN1SWP03999 348 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 ETFAP13804 333 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 IDUAP35475 653 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 SERPINB10P48595 397 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 HBA1P69905 142 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 SLBPQ14493 270 aaKnown RBP eCLIP16.55■□□□□ 0.24
NEK3-206ENST00000611833 ZNF385BQ569K4 471 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 ADCK1Q86TW2 530 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 ENTHD1Q8IYW4 607 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 CXorf40BQ96DE9 158 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 KCNC2Q96PR1 638 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 SLC35A5Q9BS91 424 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 WDR12Q9GZL7 423 aaKnown RBP16.55■□□□□ 0.24
NEK3-206ENST00000611833 ATP6V1HQ9UI12 483 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 ZNF451Q9Y4E5 1061 aa16.55■□□□□ 0.24
NEK3-206ENST00000611833 ADAMDEC1O15204 470 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 WBP4O75554 376 aaKnown RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 NADKO95544 446 aaPredicted RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 C6orf47O95873 294 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 TGFB1P01137 390 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 NPPBP16860 134 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 ZNF8P17098 575 aaPredicted RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 PRIM2P49643 509 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 ZNF658BQ4V348 819 aaPredicted RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 COX20Q5RI15 118 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 ZNF852Q6ZMS4 543 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 COMMD6Q7Z4G1 85 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 TRIM74Q86UV6 250 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 VN1R2Q8NFZ6 395 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 LRIG1Q96JA1 1093 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 HRASLS5Q96KN8 279 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 EXO1Q9UQ84 846 aaKnown RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 GCM2O75603 506 aaPredicted RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 SOD1P00441 154 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 TNFRSF1BP20333 461 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 CSNK2BP67870 215 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 E2F2Q14209 437 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 HIST2H2ACQ16777 129 aaPredicted RBP16.54■□□□□ 0.24
NEK3-206ENST00000611833 PAGE2BQ5JRK9 111 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 EGFLAMQ63HQ2 1017 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 HIST2H2AA3Q6FI13 130 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 TRAPPC5Q8IUR0 188 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 NRSN1Q8IZ57 195 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 LMNTD1Q8N9Z9 388 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 FEVQ99581 238 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 EFCAB11Q9BUY7 163 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 GABARAPL3Q9BY60 117 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 NDUFAF4Q9P032 175 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 SPASTQ9UBP0 616 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 SH2B3Q9UQQ2 575 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 PCDHGA6Q9Y5G7 932 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 PCM1Q15154 2024 aa16.54■□□□□ 0.24
NEK3-206ENST00000611833 FUOMA2VDF0 154 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 SOBPA7XYQ1 873 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 TMEM229AB2RXF0 380 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 SPINT1O43278 529 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 VIPP01282 170 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 C1GALT1C1LP0DN25 315 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 MC1RQ01726 317 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 C2orf80Q0P641 193 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 DHCR24Q15392 516 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 PRSS36Q5K4E3 855 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 GCNT6Q5T4J0 391 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 Q6ZPB1 254 aaPredicted RBP16.53■□□□□ 0.24
NEK3-206ENST00000611833 FAM124AQ86V42 546 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 NLRP8Q86W28 1048 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 C12orf40Q86WS4 652 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 OR52J3Q8NH60 311 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 APH1BQ8WW43 257 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 S100ZQ8WXG8 99 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 PPCDCQ96CD2 204 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 OTUB2Q96DC9 234 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 VMP1Q96GC9 406 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
NEK3-206ENST00000611833 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 ZNF300Q96RE9 604 aaPredicted RBP16.53■□□□□ 0.24
NEK3-206ENST00000611833 OR51B5Q9H339 312 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 RNF6Q9Y252 685 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 LYVE1Q9Y5Y7 322 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 FOXE1O00358 373 aaPredicted RBP16.53■□□□□ 0.24
NEK3-206ENST00000611833 FUCA1P04066 466 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 CISD3P0C7P0 127 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 OR1E2P47887 323 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 DGKGP49619 791 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 NCS1P62166 190 aa16.53■□□□□ 0.24
NEK3-206ENST00000611833 PPIGQ13427 754 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms