RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RPS19BP1Q86WX3 136 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 IGDCC3Q8IVU1 814 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 CYP4X1Q8N118 509 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 KIF2BQ8N4N8 673 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 HORMAD2Q8N7B1 307 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 TMEM178AQ8NBL3 297 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 ELP5Q8TE02 316 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 TBC1D20Q96BZ9 403 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 PTCHD1Q96NR3 888 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 OR4K3Q96R72 315 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 TRIM54Q9BYV2 358 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 SPNS1Q9H2V7 528 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 LRFN1Q9P244 771 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 NPIPA1Q9UND3 350 aa12.57□□□□□ -0.4
POLR2J3-219ENST00000608621 CSMD1Q96PZ7 3565 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 PABPN1LA6NDY0 278 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 DNALI1O14645 258 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 ZNHIT1O43257 154 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 ASNA1O43681 348 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 NEURL1O76050 574 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 GUCA1CO95843 209 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 ZNF888P0CJ79 500 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 COX6B1P14854 86 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 POU3F2P20265 443 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 FNTAP49354 379 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 SMSP52788 366 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 AP1S2P56377 157 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 BTG2P78543 158 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 RGS1Q08116 209 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 PPP1R7Q15435 360 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 MAPKAPK3Q16644 382 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 TEDDM1Q5T9Z0 273 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 HECTD2Q5U5R9 776 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 ZNF468Q5VIY5 522 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 Q6ZPB1 254 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 CNTN4Q8IWV2 1026 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 TBC1D19Q8N5T2 526 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 NT5CQ8TCD5 201 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 NEIL2Q969S2 332 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 FBXL8Q96CD0 374 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 CERS2Q96G23 380 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 MAGED4Q96JG8 741 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 FRMD6Q96NE9 622 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 OSBPL9Q96SU4 736 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 PPANQ9NQ55 473 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 SLC17A6Q9P2U8 582 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 ZFP69BQ9UJL9 534 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 VWA7Q9Y334 891 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 PDZD2O15018 2839 aa12.56□□□□□ -0.4
POLR2J3-219ENST00000608621 A8MUA0 341 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 NRDCO43847 1150 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 PRMT3O60678 531 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 AGAP20933 346 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 JAK1P23458 1154 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 PTGER4P35408 488 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 HNF4AP41235 474 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 SCTRP47872 440 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 SKP1P63208 163 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 BBS9Q3SYG4 887 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 NIPAL1Q6NVV3 410 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 KIAA0408Q6ZU52 694 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 ABHD13Q7L211 337 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 GDF7Q7Z4P5 450 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 STRA8Q7Z7C7 330 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 SIAH3Q8IW03 269 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 LGI4Q8N135 537 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 GPATCH11Q8N954 259 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 FAM98AQ8NCA5 519 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 UTP15Q8TED0 518 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 SLC5A11Q8WWX8 675 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 ATL1Q8WXF7 558 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 NAT9Q9BTE0 207 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 ASIC3Q9UHC3 531 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 IKZF3Q9UKT9 509 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 MEMO1Q9Y316 297 aa12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 TEP1Q99973 2627 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-219ENST00000608621 CTAGE15A4D2H0 777 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 CDK2AP1O14519 115 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 SMIM10L1P0DMW3 83 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 ABOP16442 354 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 TPP2P29144 1249 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 AHRP35869 848 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 MLF1P58340 268 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 RAB8AP61006 207 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 RBBP5Q15291 538 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 CDSNQ15517 529 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 RNFT1Q5M7Z0 435 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 FAM45BPQ6NSW5 357 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 QSOX2Q6ZRP7 698 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 NCCRP1Q6ZVX7 275 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 GALNT7Q86SF2 657 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 CTAGE6Q86UF2 777 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 THOC6Q86W42 341 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 ZNF227Q86WZ6 799 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 GHDCQ8N2G8 530 aa12.54□□□□□ -0.4
POLR2J3-219ENST00000608621 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms