RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 TNFRSF10DQ9UBN6 386 aa5.91□□□□□ -1.46
CUX1-220ENST00000607092 MRPS33Q9Y291 106 aaKnown RBP5.91□□□□□ -1.46
CUX1-220ENST00000607092 ASB1Q9Y576 335 aa5.91□□□□□ -1.46
CUX1-220ENST00000607092 MAD1L1Q9Y6D9 718 aa5.91□□□□□ -1.46
CUX1-220ENST00000607092 SCN2AQ99250 2005 aa5.91□□□□□ -1.46
CUX1-220ENST00000607092 GTF3C1Q12789 2109 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 A0A088AWK7 358 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CTAGE9A4FU28 777 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 OR14I1A6ND48 311 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 SAGE2PA6NJ88 616 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 ESPNB1AK53 854 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 C19orf84I3L1E1 186 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 GFYI3L273 518 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 FFAR3O14843 346 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 SLC16A5O15375 505 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 GPR42O15529 346 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 NIPSNAP2O75323 286 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 GOSR1O95249 250 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TUBB4AP04350 444 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 C8GP07360 202 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 DRD2P14416 443 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 ALOX12P18054 663 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 IL1RNP18510 177 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TFEBP19484 476 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TPSB2P20231 275 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 ZNF10P21506 573 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 MSX1P28360 303 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CCR8P51685 355 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CLCN2P51788 898 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 MLF1P58340 268 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 RHAGQ02094 409 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TBL3Q12788 808 aaKnown RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 SF3B4Q15427 424 aaKnown RBP eCLIP5.9□□□□□ -1.46
CUX1-220ENST00000607092 TPSAB1Q15661 275 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CCNG2Q16589 344 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 SYT16Q17RD7 645 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 SLC25A35Q3KQZ1 300 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 CTSL3PQ5NE16 218 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 NDUFAF5Q5TEU4 345 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 FCRLBQ6BAA4 426 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CAPN13Q6MZZ7 669 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 NEPROQ6NW34 567 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 DRICH1Q6PGQ1 229 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 QSOX2Q6ZRP7 698 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 GK5Q6ZS86 529 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 KIAA0408Q6ZU52 694 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CEP128Q6ZU80 1094 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 GSTA5Q7RTV2 222 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CAMKMTQ7Z624 323 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 STRA8Q7Z7C7 330 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 LDB1Q86U70 411 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 SLC22A16Q86VW1 577 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TGIF2LYQ8IUE0 185 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CYP4Z2PQ8N1L4 340 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 DTWD1Q8N5C7 304 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TMEM156Q8N614 296 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 PRELID2Q8N945 189 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 ZFP62Q8NB50 900 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.9□□□□□ -1.46
CUX1-220ENST00000607092 TRPV3Q8NET8 790 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 OR5M3Q8NGP4 307 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 KCTD12Q96CX2 325 aaKnown RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 TM4SF19Q96DZ7 209 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 HES6Q96HZ4 224 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 TSPAN10Q9H1Z9 355 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 CXXC4Q9H2H0 198 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 CDCP1Q9H5V8 836 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 ANKRD10Q9NXR5 420 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 STOX2Q9P2F5 926 aaPredicted RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 B4GALT7Q9UBV7 327 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 SOX13Q9UN79 622 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 RUVBL2Q9Y230 463 aaKnown RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 R3HDM2Q9Y2K5 976 aaKnown RBP5.9□□□□□ -1.46
CUX1-220ENST00000607092 NAALAD2Q9Y3Q0 740 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 NEU2Q9Y3R4 380 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 MMACHCQ9Y4U1 282 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 DUSP10Q9Y6W6 482 aa5.9□□□□□ -1.46
CUX1-220ENST00000607092 HEATR5BQ9P2D3 2071 aa5.9□□□□□ -1.47
CUX1-220ENST00000607092 MXRA5Q9NR99 2828 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 DNAJC13O75165 2243 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 IGHV3-20A0A0C4DH32 117 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 A0A1B0GTH9 108 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 FAM237BA0A1B0GVD1 139 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 GRID2IPA4D2P6 1211 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 FAM171A2A8MVW0 826 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 SGK494L7N484 410 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 CLDN4O14493 209 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 ADAM10O14672 748 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 P2RX6O15547 441 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 PEX1O43933 1283 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 NRP2O60462 931 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 WDR1O75083 606 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 RDH16O75452 317 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 MLNP12872 115 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 RNH1P13489 461 aaKnown RBP5.89□□□□□ -1.47
CUX1-220ENST00000607092 DNASE1P24855 282 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 GSTM2P28161 218 aa5.89□□□□□ -1.47
CUX1-220ENST00000607092 TPP2P29144 1249 aaPredicted RBP5.89□□□□□ -1.47
CUX1-220ENST00000607092 IMPA1P29218 277 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms