RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 THOC6Q86W42 341 aaKnown RBP7.16□□□□□ -1.26
CUX1-219ENST00000606749 ZC3HC1Q86WB0 502 aaKnown RBP7.16□□□□□ -1.26
CUX1-219ENST00000606749 TICAM1Q8IUC6 712 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 KLHL7Q8IXQ5 586 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 TBC1D19Q8N5T2 526 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 ANKRD53Q8N9V6 530 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 MDS2Q8NDY4 140 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 ELP5Q8TE02 316 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 UTP15Q8TED0 518 aaKnown RBP7.16□□□□□ -1.26
CUX1-219ENST00000606749 ITLN2Q8WWU7 325 aaPredicted RBP7.16□□□□□ -1.26
CUX1-219ENST00000606749 SLC5A11Q8WWX8 675 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 ANKRD7Q92527 254 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 TSLPQ969D9 159 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 SCMH1Q96GD3 660 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 SMIM10Q96HG1 83 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 TSNARE1Q96NA8 513 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 UTP23Q9BRU9 249 aaKnown RBP7.16□□□□□ -1.26
CUX1-219ENST00000606749 RBCK1Q9BYM8 510 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 KCNF1Q9H3M0 494 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 KLHL31Q9H511 634 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 CDCP1Q9H5V8 836 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 CLK4Q9HAZ1 481 aaKnown RBP7.16□□□□□ -1.26
CUX1-219ENST00000606749 ANKRD10Q9NXR5 420 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 MOCS1Q9NZB8 636 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 ENTPD4Q9Y227 616 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 SLC22A14Q9Y267 594 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 PSAT1Q9Y617 370 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 DOPEY1Q5JWR5 2465 aa7.16□□□□□ -1.26
CUX1-219ENST00000606749 TRGV8A0A0C4DH27 118 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 URADA6NGE7 173 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 USP27XA6NNY8 438 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 GABRR3A8MPY1 467 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 PRSS44E7EML9 344 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 FAM227AF5H4B4 570 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CDK2AP1O14519 115 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 HNRNPRO43390 633 aaKnown RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 PRMT3O60678 531 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 SEC31AO94979 1220 aaKnown RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 SP1P08047 785 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 SERPINA6P08185 405 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CD46P15529 392 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 ZNF37AP17032 561 aaPredicted RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 SAT1P21673 171 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 JAK1P23458 1154 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 HNF4AP41235 474 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CA7P43166 264 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 TAS2R39P59534 338 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 TAS2R50P59544 299 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 RAB8AP61006 207 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CDKL1Q00532 357 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 REEP5Q00765 189 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 RBPJQ06330 500 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 MGAT5Q09328 741 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 PDIA2Q13087 525 aaKnown RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 CBLBQ13191 982 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 ART3Q13508 389 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 RBBP5Q15291 538 aaKnown RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 OR1C1Q15619 314 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 KRTCAP3Q53RY4 240 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 RPS19BP1Q86WX3 136 aaKnown RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 ANKMY2Q8IV38 441 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CYP4X1Q8N118 509 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 KIF2BQ8N4N8 673 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 NKAPQ8N5F7 415 aaKnown RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 SLC5A8Q8N695 610 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 NFAM1Q8NET5 270 aaPredicted RBP7.15□□□□□ -1.26
CUX1-219ENST00000606749 TRPV3Q8NET8 790 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CREB3L4Q8TEY5 395 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 ANKRD49Q8WVL7 239 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 MARVELD3Q96A59 401 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CCDC120Q96HB5 630 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 CAPZA3Q96KX2 299 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 PTCHD1Q96NR3 888 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 AIF1LQ9BQI0 150 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 TRIM51Q9BSJ1 452 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 MCMBPQ9BTE3 642 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 HES7Q9BYE0 225 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 SLC6A16Q9GZN6 736 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 AICDAQ9GZX7 198 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 PELI2Q9HAT8 420 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 KLHL1Q9NR64 748 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 DYRK1BQ9Y463 629 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 KCNE2Q9Y6J6 123 aa7.15□□□□□ -1.26
CUX1-219ENST00000606749 IGKV3D-11A0A0A0MRZ8 115 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 FAM95CA0A1B0GW59 222 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ARHGAP10A1A4S6 786 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ASPDHA6ND91 283 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 NPEPPSL1A6NEC2 478 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ENO4A6NNW6 628 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 A8MUA0 341 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 E7ESA3 106 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 NDC80O14777 642 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 SLC19A2O60779 497 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 H2AFYO75367 372 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 NEURL1O76050 574 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 C1GALT1C1LP0DN25 315 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 RNH1P13489 461 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 PRF1P14222 555 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 MAOAP21397 527 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms