RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZFPL1O95159 310 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 GPIP06744 558 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 UCHL3P15374 230 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 HIBADHP31937 336 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 TGFBR2P37173 567 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 BTG1P62324 171 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 RPS6P62753 249 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 IRF3Q14653 427 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 HSDL1Q3SXM5 330 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SOWAHCQ53LP3 525 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SGO1Q5FBB7 561 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MEDAGQ5VYS4 303 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF772Q68DY9 489 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 FAM199XQ6PEV8 388 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PLET1Q6UQ28 207 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 EPGNQ6UW88 154 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 HACD2Q6Y1H2 254 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PRSS35Q8N3Z0 413 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 OR5M1Q8NGP8 315 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 LNX1Q8TBB1 728 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SLC38A4Q969I6 547 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PABPC5Q96DU9 382 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MRPS24Q96EL2 167 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 L3HYPDHQ96EM0 354 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PRMT6Q96LA8 375 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SLC38A2Q96QD8 506 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 ZSCAN10Q96SZ4 725 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MAPKAP1Q9BPZ7 522 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SORBS1Q9BX66 1292 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MMP28Q9H239 520 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 C12orf65Q9H3J6 166 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 REEP4Q9H6H4 257 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 SIRT7Q9NRC8 400 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 TBC1D13Q9NVG8 400 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PCDHA6Q9UN73 950 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 MRPS18CQ9Y3D5 142 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 PCDHA2Q9Y5H9 948 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 CHD5Q8TDI0 1954 aa8.57□□□□□ -1.04
COMMD3-215ENST00000602574 TNRC6CQ9HCJ0 1690 aaKnown RBP8.57□□□□□ -1.04
COMMD3-215ENST00000602574 TNS2Q63HR2 1409 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 METTL21EPA6NDL7 271 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 NEMP2A6NFY4 417 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 E9PI62 339 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 DSCR3O14972 297 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 BCAT2O15382 392 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 VPS26AO75436 327 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CLIC3O95833 236 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 F2P00734 622 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 APOC3P02656 99 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SERPINE1P05121 402 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 GJB1P08034 283 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 NMBP08949 121 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 DAOP14920 347 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 IFNGR1P15260 489 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CYP2B6P20813 491 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 UBA1P22314 1058 aaKnown RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CNTFP26441 200 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CA5AP35218 305 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 DHPSP49366 369 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 MAD2L1Q13257 205 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SERTAD2Q14140 314 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SCARF1Q14162 830 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 KRT33BQ14525 404 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PRPSAP1Q14558 356 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 RPS26P11Q5JNZ5 115 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SAMD4BQ5PRF9 694 aaKnown RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 HACD4Q5VWC8 232 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 KLHL24Q6TFL4 600 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PTCHD4Q6ZW05 846 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 P4HA3Q7Z4N8 544 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 DNAJB7Q7Z6W7 309 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 IQCHQ86VS3 1027 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 LDHDQ86WU2 507 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 UNC5BQ8IZJ1 945 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PAPD5Q8NDF8 572 aaKnown RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 FAM46DQ8NEK8 389 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 RCN3Q96D15 328 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CCDC126Q96EE4 140 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CALML4Q96GE6 196 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 MS4A3Q96HJ5 214 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 BOD1Q96IK1 185 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CELF6Q96J87 481 aaKnown RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PPM1MQ96MI6 270 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 MUS81Q96NY9 551 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 TMEM175Q9BSA9 504 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 POTEKPQ9BYX7 375 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 C20orf27Q9GZN8 174 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 MUC13Q9H3R2 512 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 C1orf112Q9NSG2 853 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 FEM1BQ9UK73 627 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PUS1Q9Y606 427 aaKnown RBP eCLIP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 A0A1B0GVI7 797 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 OR2AT4A6NND4 320 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 D6RAR5 112 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 BLOC1S5-TXNDC5H3BN57 136 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SLC1A7O00341 560 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms