RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ERVW-1Q9UQF0 538 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 DENRO43583 198 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OAZ2O95190 189 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 MT-ND2P03891 347 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ACVR2AP27037 513 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 MAGEA3P43357 314 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF311Q5JNZ3 666 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GPRC6AQ5T6X5 926 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 NUP54Q7Z3B4 507 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CHERPQ8IWX8 916 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 C1orf127Q8N9H9 656 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR9I1Q8NGQ6 314 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 DCAKDQ8WVC6 231 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR2AG1Q9H205 316 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 WASH6PQ9NQA3 447 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SLIT3O75094 1523 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OPN1SWP03999 348 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 LCKP06239 509 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 IDSP22304 550 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 AHCYP23526 432 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 FTMTQ8N4E7 242 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR14K1Q8NGZ2 314 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 IRGQQ8WZA9 623 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CNDP2Q96KP4 475 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR10A4Q9H209 315 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 MGAT4BQ9UQ53 548 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ANKRD33BA6NCL7 494 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SFTPBP07988 381 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZBTB48P10074 688 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF616Q08AN1 781 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 EIPR1Q53HC9 387 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZFP82Q8N141 532 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR4Q3Q8NH05 313 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GRHL3Q8TE85 626 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 NR4A3Q92570 626 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 LRRC3Q9BY71 257 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ADAMTS10Q9H324 1103 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF358Q9NW07 568 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CCDC163A0A0D9SF12 145 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TREHO43280 583 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 EDNRAP25101 427 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 C4orf32Q8N8J7 132 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ANKFN1Q8N957 763 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF675Q8TD23 568 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SLC13A3Q8WWT9 602 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 HSH2DQ96JZ2 352 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 LURAP1Q96LR2 239 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SMOXQ9NWM0 555 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 B3GALT2O43825 422 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 NPHS1O60500 1241 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 KERAO60938 352 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 LDOC1O95751 146 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SLC35G6P0C7Q6 338 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CHRNB2P17787 502 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 RPL17P18621 184 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 DUSP28Q4G0W2 176 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TCEAL6Q6IPX3 200 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SSX9Q7RTT3 188 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TMEM185AQ8NFB2 350 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GPR151Q8TDV0 419 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 MUS81Q96NY9 551 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 NLKQ9UBE8 527 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PCDHGA8Q9Y5G5 932 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CXorf49A8MYA2 514 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PRKAR1BP31321 381 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 INTS6LQ5JSJ4 861 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 USP50Q70EL3 339 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CEP97Q8IW35 865 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 AQP11Q8NBQ7 271 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ZFP90Q8TF47 636 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 METTL21AQ8WXB1 218 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ELMOD3Q96FG2 381 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GPR20Q99678 358 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TSSK6Q9BXA6 273 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 DEC1Q9P2X7 70 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ACSL5Q9ULC5 683 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ARPC5O15511 151 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 IFNA2P01563 188 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TRIM23P36406 574 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 MAGEB1P43366 347 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ETV1P50549 477 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR12D2P58182 307 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 C1QTNF8P60827 252 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PSMG2Q969U7 264 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 COL20A1Q9P218 1284 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SLC22A2O15244 555 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 AFF3P51826 1226 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 E2F1Q01094 437 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 ASTE1Q2TB18 679 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 XKR4Q5GH76 650 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 KANK2Q63ZY3 851 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PNCKQ6P2M8 343 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PAPD4Q6PIY7 484 aaKnown RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PCED1BQ96HM7 432 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TMEM74Q96NL1 305 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 OR2M4Q96R27 311 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms