RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 WFS1O76024 890 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 BMP10O95393 424 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 CD22P20273 847 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 HNF4AP41235 474 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 PIK3CGP48736 1102 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 C19orf57Q0VDD7 668 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 DEFB134Q4QY38 66 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 DCAF10Q5QP82 559 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 KIRREL2Q6UWL6 708 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 TDRPQ86YL5 185 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 PTGR2Q8N8N7 351 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-215ENST00000601150 CLEC1AQ8NC01 280 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 OR51Q1Q8NH59 317 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 ACMSDQ8TDX5 336 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 UTP15Q8TED0 518 aaKnown RBP15.95■□□□□ 0.14
TRIM28-215ENST00000601150 CCT6BQ92526 530 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 UBE2E3Q969T4 207 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 RHBGQ9H310 441 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 KLHL31Q9H511 634 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRIM28-215ENST00000601150 FBXL4Q9UKA2 621 aa15.95■□□□□ 0.14
TRIM28-215ENST00000601150 ZNF490Q9ULM2 529 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-215ENST00000601150 V9GYY5 206 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-215ENST00000601150 ZNF860A6NHJ4 632 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 LRRC14BA6NHZ5 514 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 STX16-NPEPL1H3BU86 382 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 STX16O14662 325 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 CLEC3AO75596 197 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 CEACAM4O75871 244 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 SIX3O95343 332 aaPredicted RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 HEXBP07686 556 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 IL10P22301 178 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 HPDP32754 393 aaPredicted RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 HSD17B3P37058 310 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 XCR1P46094 333 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 RAB8AP61006 207 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 NFATC3Q12968 1075 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 GTF2H2Q13888 395 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 TUBB8Q3ZCM7 444 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 LACTB2Q53H82 288 aaPredicted RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 TCTN3Q6NUS6 607 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 GTF2H2CQ6P1K8 395 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 AENQ8WTP8 325 aaKnown RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 MZB1Q8WU39 189 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 GAL3ST3Q96A11 431 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 SLC25A23Q9BV35 468 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 CLK4Q9HAZ1 481 aaKnown RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 ZNF71Q9NQZ8 489 aaPredicted RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 MKL2Q9ULH7 1088 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 G3BP2Q9UN86 482 aaKnown RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 TP53TG5Q9Y2B4 290 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 PCDHGA9Q9Y5G4 932 aaKnown RBP15.94■□□□□ 0.14
TRIM28-215ENST00000601150 KALRNO60229 2985 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 SCN2AQ99250 2005 aa15.94■□□□□ 0.14
TRIM28-215ENST00000601150 LRIT2A6NDA9 550 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 GOLGA8RI6L899 631 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 E2F3O00716 465 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 PCDH17O14917 1159 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 B3GALT4O96024 378 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 CYC1P08574 325 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 SMIM10L1P0DMW3 83 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 PYGBP11216 843 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 ACPPP15309 386 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 EEF1DP29692 281 aaKnown RBP15.93■□□□□ 0.14
TRIM28-215ENST00000601150 HNRNPH1P31943 449 aaKnown RBP15.93■□□□□ 0.14
TRIM28-215ENST00000601150 SLCO1A2P46721 670 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 RASA2Q15283 850 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 MFSD4BQ5TF39 518 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 ADNP2Q6IQ32 1131 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 GRHL2Q6ISB3 625 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 MED27Q6P2C8 311 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 EMBQ6PCB8 327 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 GOLGA7Q7Z5G4 137 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 VN1R5Q7Z5H4 357 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 LAS2Q8IYD9 372 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 OR11G2Q8NGC1 345 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 OR5T3Q8NGG3 340 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 PHF21BQ96EK2 531 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 SMIM10Q96HG1 83 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 AICDAQ9GZX7 198 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 ATP13A2Q9NQ11 1180 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 TMEM216Q9P0N5 145 aa15.93■□□□□ 0.14
TRIM28-215ENST00000601150 TLN1Q9Y490 2541 aaKnown RBP15.93■□□□□ 0.14
TRIM28-215ENST00000601150 A6NL46 340 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 SMIM23A6NLE4 172 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 CHST10O43529 356 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 JRKO75564 520 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 GSTA1P08263 222 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 SBK3P0C264 359 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 SERPINB1P30740 379 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 PGDP52209 483 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 AIMP2Q13155 320 aaKnown RBP15.92■□□□□ 0.14
TRIM28-215ENST00000601150 ERCC6LQ2NKX8 1250 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 MINDY4Q4G0A6 757 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 LIPJQ5W064 366 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 MYLK4Q86YV6 388 aaPredicted RBP15.92■□□□□ 0.14
TRIM28-215ENST00000601150 TMEM151AQ8N4L1 468 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 FDCSPQ8NFU4 85 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 EPS8L3Q8TE67 593 aaKnown RBP15.92■□□□□ 0.14
TRIM28-215ENST00000601150 MS4A6EQ96DS6 147 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms