RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	DDIAS	Q8IXT1	998 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF655	Q8N720	491 aa	Predicted RBP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	TRIM55	Q9BYV6	548 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	SPRY4	Q9C004	299 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	ENAM	Q9NRM1	1142 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	STARD5	Q9NSY2	213 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	PCDHB3	Q9Y5E6	796 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	DNAJC15	Q9Y5T4	150 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	FER1L5	A0AVI2	2057 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	TRPC5OS	A6NMA1	111 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	P2RX6	O15547	441 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF749	O43361	778 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	TLX3	O43711	291 aa	Predicted RBP	20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	CPNE3	O75131	537 aa	Known RBP	20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	PDYN	P01213	254 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	STATH	P02808	62 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	NTRK1	P04629	796 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	HTR6	P50406	440 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	SEC24C	P53992	1094 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	PDCD2	Q16342	344 aa	Predicted RBP	20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	RNF165	Q6ZSG1	346 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	CPLX4	Q7Z7G2	160 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	CSNK1A1L	Q8N752	337 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	ANKRD53	Q8N9V6	530 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	TTC29	Q8NA56	475 aa	Predicted RBP	20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	HUS1B	Q8NHY5	278 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	SIKE1	Q9BRV8	207 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	ACTR5	Q9H9F9	607 aa	Predicted RBP	20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	USH1C	Q9Y6N9	552 aa		20.91	■□□□□ 0.94
LTBP4-227	ENST00000600026	TEX51	A0A1B0GUA7	166 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	SERTM1	A2A2V5	107 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	FITM1	A5D6W6	292 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	STMND1	H3BQB6	276 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	SLC28A1	O00337	649 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	FOXE1	O00358	373 aa	Predicted RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	SHOX2	O60902	331 aa	Predicted RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	CLEC3A	O75596	197 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	SERPIND1	P05546	499 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	HSD3B1	P14060	373 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	HSD3B2	P26439	372 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	GCGR	P47871	477 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	NEK2	P51955	445 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	PCBP4	P57723	403 aa	Known RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	CYP4F2	P78329	520 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	CSTF3	Q12996	717 aa	Known RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	GRM7	Q14831	915 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	ABRAXAS2	Q15018	415 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	IMPG1	Q17R60	797 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	HKDC1	Q2TB90	917 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	PRTG	Q2VWP7	1150 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	ASPG	Q86U10	573 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	GBP7	Q8N8V2	638 aa	Predicted RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	CAMKV	Q8NCB2	501 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF473	Q8WTR7	871 aa	Known RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	FGF11	Q92914	225 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	MTERF1	Q99551	399 aa	Known RBP	20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	NLN	Q9BYT8	704 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	SLC7A5P2	Q9GIP4	190 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	EPN3	Q9H201	632 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	BRF2	Q9HAW0	419 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	NMRK1	Q9NWW6	199 aa		20.9	■□□□□ 0.94
LTBP4-227	ENST00000600026	TXNDC9	O14530	226 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	PIP5K1B	O14986	540 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	SLC35G6	P0C7Q6	338 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	RGS1	Q08116	209 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	SCIMP	Q6UWF3	145 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	TIPARP	Q7Z3E1	657 aa	Known RBP	20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	SLC38A9	Q8NBW4	561 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	GALNT6	Q8NCL4	622 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	SNIP1	Q8TAD8	396 aa	Known RBP	20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	SLC13A3	Q8WWT9	602 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	CLIP3	Q96DZ5	547 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	TM4SF19	Q96DZ7	209 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	CMTM7	Q96FZ5	175 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	NUF2	Q9BZD4	464 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	NPHS2	Q9NP85	383 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	DMRT3	Q9NQL9	472 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	FARSB	Q9NSD9	589 aa	Known RBP	20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	RIC8B	Q9NVN3	520 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	PSD3	Q9NYI0	1048 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	PPT2	Q9UMR5	302 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	SRPK3	Q9UPE1	567 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	RUVBL1	Q9Y265	456 aa	Known RBP	20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	FRY	Q5TBA9	3013 aa		20.89	■□□□□ 0.93
LTBP4-227	ENST00000600026	MAGEB17	A8MXT2	336 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	NDUFS4	O43181	175 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	RGS14	O43566	566 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	RAD1	O60671	282 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	HBQ1	P09105	142 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	LINC00032	P0C843	101 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	LIPC	P11150	499 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	PTX3	P26022	381 aa	Predicted RBP	20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	RPS13	P62277	151 aa	Known RBP	20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	BTK	Q06187	659 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	PWP1	Q13610	501 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	MAP7	Q14244	749 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	YOD1	Q5VVQ6	348 aa	Predicted RBP	20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	FAM219B	Q5XKK7	198 aa		20.88	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms