RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 LMF1Q96S06 567 aa13.53□□□□□ -0.24
IRF3-224ENST00000599680 AGPAT4Q9NRZ5 378 aa13.53□□□□□ -0.24
IRF3-224ENST00000599680 DNAJC11Q9NVH1 559 aa13.53□□□□□ -0.24
IRF3-224ENST00000599680 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
IRF3-224ENST00000599680 MTRF1LQ9UGC7 380 aaKnown RBP13.53□□□□□ -0.24
IRF3-224ENST00000599680 CSAG2Q9Y5P2 127 aa13.53□□□□□ -0.24
IRF3-224ENST00000599680 PSMD12O00232 456 aaPredicted RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 CDC123O75794 336 aaPredicted RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 FAM155BO75949 473 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 AGFG2O95081 481 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 ITGAMP11215 1152 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 CRABP2P29373 138 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 SLC6A12P48065 614 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 RAB8AP61006 207 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 STXBP1P61764 594 aaKnown RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 SLBPQ14493 270 aaKnown RBP eCLIP13.52□□□□□ -0.25
IRF3-224ENST00000599680 ABRAXAS2Q15018 415 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 NR6A1Q15406 480 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 NSDHLQ15738 373 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 ZKSCAN8Q15776 578 aaPredicted RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 UAP1Q16222 522 aaPredicted RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 BTBD16Q32M84 506 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 TOR1AIP1Q5JTV8 583 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 CDKL4Q5MAI5 379 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 ABHD17BQ5VST6 288 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 B3GNTL1Q67FW5 361 aaPredicted RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 SULT1C3Q6IMI6 304 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 ANKRD37Q7Z713 158 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 AFAP1L2Q8N4X5 818 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 ANKRD53Q8N9V6 530 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 TTLQ8NG68 377 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 OR5T3Q8NGG3 340 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
IRF3-224ENST00000599680 FAR2Q96K12 515 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 TEKT2Q9UIF3 430 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 PCDHGA10Q9Y5H3 936 aa13.52□□□□□ -0.25
IRF3-224ENST00000599680 USP9XQ93008 2570 aaPredicted RBP13.51□□□□□ -0.25
IRF3-224ENST00000599680 IGHV3-20A0A0C4DH32 117 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 ANKDD1BA6NHY2 528 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 TCP11X1B4DZS4 312 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 SUPT3HB4E1H0 165 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 CHST10O43529 356 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 CCNT2O60583 730 aaKnown RBP13.51□□□□□ -0.25
IRF3-224ENST00000599680 SUPT3HO75486 399 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 STK16O75716 305 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 WISP3O95389 354 aaPredicted RBP13.51□□□□□ -0.25
IRF3-224ENST00000599680 FHP07954 510 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 SERPINA6P08185 405 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 CELA2AP08217 269 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 HPDP32754 393 aaPredicted RBP13.51□□□□□ -0.25
IRF3-224ENST00000599680 TSFMP43897 325 aaKnown RBP13.51□□□□□ -0.25
IRF3-224ENST00000599680 HSPA7P48741 367 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 OLR1P78380 273 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 ZNF33BQ06732 778 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.256e-7■■■■■ 47.1
IRF3-224ENST00000599680 OR4D1Q15615 310 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 PDK4Q16654 411 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 TMIGD1Q6UXZ0 262 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 CMC1Q7Z7K0 106 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 KLHDC8AQ8IYD2 350 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 OR1N1Q8NGS0 311 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 SUN3Q8TAQ9 357 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 STAG3L4Q8TBR4 150 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 UTP15Q8TED0 518 aaKnown RBP13.51□□□□□ -0.25
IRF3-224ENST00000599680 KIAA1191Q96A73 305 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 TBC1D20Q96BZ9 403 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 SLC6A16Q9GZN6 736 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.51□□□□□ -0.25
IRF3-224ENST00000599680 RHBGQ9H310 441 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 ALG9Q9H6U8 611 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 GPRC5BQ9NZH0 403 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 SVILO95425 2214 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 ZGRF1Q86YA3 2104 aa13.51□□□□□ -0.25
IRF3-224ENST00000599680 A0A088AWK7 358 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 OR2W5A6NFC9 320 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 A8MUI8 341 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 MAGEB17A8MXT2 336 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 TAPBPO15533 448 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 B4GALT2O60909 372 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 B3GALT4O96024 378 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 C1QAP02745 245 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 LTA4HP09960 611 aaKnown RBP13.5□□□□□ -0.25
IRF3-224ENST00000599680 MYBL2P10244 700 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 RNH1P13489 461 aaKnown RBP13.5□□□□□ -0.25
IRF3-224ENST00000599680 TFEBP19484 476 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 ZNF10P21506 573 aaPredicted RBP13.5□□□□□ -0.25
IRF3-224ENST00000599680 GSTM2P28161 218 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 SOX11P35716 441 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 GGT5P36269 586 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 EFNA3P52797 238 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 OR4D2P58180 307 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 MRPL49Q13405 166 aaKnown RBP13.5□□□□□ -0.25
IRF3-224ENST00000599680 EXT1Q16394 746 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 HIST2H2ACQ16777 129 aaPredicted RBP13.5□□□□□ -0.25
IRF3-224ENST00000599680 SFT2D3Q587I9 215 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 FBXO48Q5FWF7 155 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 XKR6Q5GH73 641 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 HIST2H2AA3Q6FI13 130 aa13.5□□□□□ -0.25
IRF3-224ENST00000599680 FAM180AQ6UWF9 173 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms