RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 OR5H15A6NDH6 313 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 NDUFS4O43181 175 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 LCMT2O60294 686 aaKnown RBP17.67■□□□□ 0.42
PNKP-213ENST00000599543 RDH16O75452 317 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 TSPAN12O95859 305 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 STSP08842 583 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 GSTA2P09210 222 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 GMPRP36959 345 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 HERC3Q15034 1050 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 ZNF324BQ6AW86 544 aaPredicted RBP17.67■□□□□ 0.42
PNKP-213ENST00000599543 PLAG1Q6DJT9 500 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 FAM45BPQ6NSW5 357 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 PDSS2Q86YH6 399 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 MFSD9Q8NBP5 474 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 FAM45AQ8TCE6 357 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 CDKL2Q92772 493 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 PYCR2Q96C36 320 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 VPS39Q96JC1 886 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 STMN3Q9NZ72 180 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 CORO1CQ9ULV4 474 aaPredicted RBP17.67■□□□□ 0.42
PNKP-213ENST00000599543 VWA7Q9Y334 891 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 NAALAD2Q9Y3Q0 740 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 SLC22A7Q9Y694 548 aa17.67■□□□□ 0.42
PNKP-213ENST00000599543 A8MUI8 341 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 RASAL1O95294 804 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 CRYABP02511 175 aaKnown RBP17.66■□□□□ 0.42
PNKP-213ENST00000599543 NPPBP16860 134 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 STX2P32856 288 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 TDGF1P3P51864 188 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 TAS2R39P59534 338 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 SKP1P63208 163 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 MEF2AQ02078 507 aaPredicted RBP17.66■□□□□ 0.42
PNKP-213ENST00000599543 UAP1Q16222 522 aaPredicted RBP17.66■□□□□ 0.42
PNKP-213ENST00000599543 TMEM207Q6UWW9 146 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 ANKRD37Q7Z713 158 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 FJX1Q86VR8 437 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 LURAP1LQ8IV03 231 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 CEP97Q8IW35 865 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 SHISA5Q8N114 240 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 TBC1D19Q8N5T2 526 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 ABHD11Q8NFV4 315 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 ATL1Q8WXF7 558 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 RBCK1Q9BYM8 510 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 UNKQ9C0B0 810 aaKnown RBP17.66■□□□□ 0.42
PNKP-213ENST00000599543 RHOJQ9H4E5 214 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 TXNDC16Q9P2K2 825 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 IKZF3Q9UKT9 509 aa17.66■□□□□ 0.42
PNKP-213ENST00000599543 LRBAP50851 2863 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 OR2W5A6NFC9 320 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 ZNF860A6NHJ4 632 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 OR1F1O43749 312 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 PRAMEF2O60811 474 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 CDC123O75794 336 aaPredicted RBP17.65■□□□□ 0.42
PNKP-213ENST00000599543 GUCA1CO95843 209 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 ENO2P09104 434 aaPredicted RBP17.65■□□□□ 0.42
PNKP-213ENST00000599543 IL10P22301 178 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 KCNK10P57789 538 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 ABRAXAS2Q15018 415 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 ZRSR2Q15696 482 aaKnown RBP17.65■□□□□ 0.42
PNKP-213ENST00000599543 NSDHLQ15738 373 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 EXT1Q16394 746 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 C1QL3Q5VWW1 255 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 GFRALQ6UXV0 394 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 AMER2Q8N7J2 671 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 OR56A3Q8NH54 315 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 PEX11GQ96HA9 241 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 OR1F2PQ96R84 312 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 RBBP8Q99708 897 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 MCMBPQ9BTE3 642 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 KCNK13Q9HB14 408 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 NSMCE4AQ9NXX6 385 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 ABI3Q9P2A4 366 aa17.65■□□□□ 0.42
PNKP-213ENST00000599543 TRBC2A0A5B9 178 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 PHGDHO43175 533 aaKnown RBP17.64■□□□□ 0.41
PNKP-213ENST00000599543 ZG16O60844 167 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 SERPIND1P05546 499 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 GP5P40197 560 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 PWP1Q13610 501 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 BMPR2Q13873 1038 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 CSHL1Q14406 222 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 SFT2D3Q587I9 215 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 ACER2Q5QJU3 275 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 FCRLBQ6BAA4 426 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 NIPAL1Q6NVV3 410 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 BEST3Q8N1M1 668 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 SPATA6LQ8N4H0 392 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 ZNF740Q8NDX6 193 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 DNAJB8Q8NHS0 232 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 FBXL8Q96CD0 374 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 ZNF354BQ96LW1 612 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 OR4K3Q96R72 315 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 CPNE1Q99829 537 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 SARGQ9BW04 601 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 ANKZF1Q9H8Y5 726 aa17.64■□□□□ 0.41
PNKP-213ENST00000599543 CSMD1Q96PZ7 3565 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 UNC5CO95185 931 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 RHAGQ02094 409 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 ACTN3Q08043 901 aaPredicted RBP17.63■□□□□ 0.41
PNKP-213ENST00000599543 RGS1Q08116 209 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 USP10Q14694 798 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms