RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	CHERP	Q8IWX8	916 aa	Known RBP	13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	LMNTD2	Q8IXW0	634 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	SPATA4	Q8NEY3	305 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	ABHD11	Q8NFV4	315 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	CALML6	Q8TD86	181 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	MCOLN3	Q8TDD5	553 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC13A3	Q8WWT9	602 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF354B	Q96LW1	612 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	PARVB	Q9HBI1	364 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF835	Q9Y2P0	537 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	PCDHGB6	Q9Y5F9	930 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC22A7	Q9Y694	548 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223		V9GYY5	206 aa	Predicted RBP	13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	MAGEB17	A8MXT2	336 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	C4orf51	C9J302	202 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	NPIPA5	E9PKD4	350 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	GALR3	O60755	368 aa	Predicted RBP	13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC35G6	P0C7Q6	338 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	PGAM1	P18669	254 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	MEP1A	Q16819	746 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	DEFB134	Q4QY38	66 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	GLE1	Q53GS7	698 aa	Known RBP	13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	RNFT1	Q5M7Z0	435 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	CATSPERE	Q5SY80	951 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	LRRC8E	Q6NSJ5	796 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	GALNTL5	Q7Z4T8	443 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF227	Q86WZ6	799 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	CNTN4	Q8IWV2	1026 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	MYO1H	Q8N1T3	1032 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	OR56A3	Q8NH54	315 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	M1AP	Q8TC57	530 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	ADAMTS18	Q8TE60	1221 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	THAP3	Q8WTV1	239 aa	Predicted RBP	13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	MAGED4	Q96JG8	741 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	OR1F2P	Q96R84	312 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	LPAR4	Q99677	370 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	UTP23	Q9BRU9	249 aa	Known RBP	13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	WDR83	Q9BRX9	315 aa	Known RBP	13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	TRIM51	Q9BSJ1	452 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	NPIPA1	Q9UND3	350 aa		13.78	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC16A5	O15375	505 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	TTI1	O43156	1089 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	OR1F1	O43749	312 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	FH	P07954	510 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	ZNF888	P0CJ79	500 aa	Predicted RBP	13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	HIVEP1	P15822	2718 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	EEF1D	P29692	281 aa	Known RBP	13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	PTGER4	P35408	488 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	RGS4	P49798	205 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	ALDH6A1	Q02252	535 aa	Known RBP	13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	RBPJ	Q06330	500 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	C2orf54	Q08AI8	447 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	C8orf74	Q6P047	294 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223		Q6ZPB1	254 aa	Predicted RBP	13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	GDF7	Q7Z4P5	450 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	FGD2	Q7Z6J4	655 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	PPIL6	Q8IXY8	311 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	ZNF295-AS1	Q8N0V1	137 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	MMGT1	Q8N4V1	131 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	SLC5A8	Q8N695	610 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	PLPP5	Q8NEB5	264 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	OR4K1	Q8NGD4	311 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	TBC1D20	Q96BZ9	403 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	TSNARE1	Q96NA8	513 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	RUNDC3B	Q96NL0	473 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	OLFM1	Q99784	485 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	SARG	Q9BW04	601 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	AICDA	Q9GZX7	198 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	ARL15	Q9NXU5	204 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	TAS2R13	Q9NYV9	303 aa		13.77	□□□□□ -0.21
IRF3-223	ENST00000599223	TRBC2	A0A5B9	178 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	CHST10	O43529	356 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	B4GALT2	O60909	372 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	ERLIN1	O75477	346 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	AHSG	P02765	367 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	ALOX12	P18054	663 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	MAOA	P21397	527 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	CCND1	P24385	295 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	TPP2	P29144	1249 aa	Predicted RBP	13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	CCR8	P51685	355 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	OR4D2	P58180	307 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	BTG2	P78543	158 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	OC90	Q02509	493 aa	Predicted RBP	13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	HYAL2	Q12891	473 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	HERC3	Q15034	1050 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	UGT3A1	Q6NUS8	523 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	MTFR2	Q6P444	385 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	SBSN	Q6UWP8	590 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	SPPL2C	Q8IUH8	684 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	CPSF7	Q8N684	471 aa	Known RBP	13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	LRRN4CL	Q8ND94	238 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	ELP5	Q8TE02	316 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	NEIL2	Q969S2	332 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	LURAP1	Q96LR2	239 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	PHF12	Q96QT6	1004 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	CDCP1	Q9H5V8	836 aa		13.76	□□□□□ -0.21
IRF3-223	ENST00000599223	MEMO1	Q9Y316	297 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms