RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ANKHQ9HCJ1 492 aa21.03■□□□□ 0.96
CHMP2A-204ENST00000597848 DMRT3Q9NQL9 472 aa21.03■□□□□ 0.96
CHMP2A-204ENST00000597848 DKK4Q9UBT3 224 aa21.03■□□□□ 0.96
CHMP2A-204ENST00000597848 CDC14AQ9UNH5 594 aa21.03■□□□□ 0.96
CHMP2A-204ENST00000597848 FIS1Q9Y3D6 152 aa21.03■□□□□ 0.96
CHMP2A-204ENST00000597848 SLC22A7Q9Y694 548 aa21.03■□□□□ 0.96
CHMP2A-204ENST00000597848 MAGEB17A8MXT2 336 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 ULK1O75385 1050 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 LYPLA1O75608 230 aaPredicted RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 LIPCP11150 499 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 IL1RNP18510 177 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 HNRNPH1P31943 449 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 RORAP35398 523 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 OR1D4P47884 311 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 AVPR1BP47901 424 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 SLC1A6P48664 564 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 ABCE1P61221 599 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 DCDP81605 110 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 GALNT1Q10472 559 aaPredicted RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 FAM53BQ14153 422 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 MAP7Q14244 749 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 HERC3Q15034 1050 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 C10orf62Q5T681 223 aaPredicted RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 ARHGEF39Q8N4T4 335 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 UTP15Q8TED0 518 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 COL26A1Q96A83 441 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 MMABQ96EY8 250 aaPredicted RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 NAF1Q96HR8 494 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 FAR2Q96K12 515 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 GBP5Q96PP8 586 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 MS4A8Q9BY19 250 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 REXO4Q9GZR2 422 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 OR51B5Q9H339 312 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 MANSC1Q9H8J5 431 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 AKIRIN1Q9H9L7 192 aaPredicted RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 TNFRSF12AQ9NP84 129 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 LHX9Q9NQ69 397 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 FARSBQ9NSD9 589 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 INTS9Q9NV88 658 aaKnown RBP21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 MAU2Q9Y6X3 613 aa21.02■□□□□ 0.96
CHMP2A-204ENST00000597848 FOXE1O00358 373 aaPredicted RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 AZIN1O14977 448 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 ERI3O43414 337 aaKnown RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 FOXS1O43638 330 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 TLX3O43711 291 aaPredicted RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 ITM2AO43736 263 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 PDYNP01213 254 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 UROSP10746 265 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 ALOX12P18054 663 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 PTX3P26022 381 aaPredicted RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 SERPINB3P29508 390 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 PLA2G16P53816 162 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 FOXA1P55317 472 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 SNRPNP63162 240 aaKnown RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 FOXK2Q01167 660 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 TGM3Q08188 693 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 BST1Q10588 318 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 TGIF1Q15583 401 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 DEFB134Q4QY38 66 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 CES4AQ5XG92 561 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 ATG16L1Q676U5 607 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 CLEC6AQ6EIG7 209 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 PRMT9Q6P2P2 845 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 FAM199XQ6PEV8 388 aaPredicted RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 IL22RA1Q8N6P7 574 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 OR9A4Q8NGU2 314 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 AGR3Q8TD06 166 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 NKD1Q969G9 470 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 GAL3ST3Q96A11 431 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 MS4A6EQ96DS6 147 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 DPH2Q9BQC3 489 aaPredicted RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 CENPKQ9BS16 269 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 CHST8Q9H2A9 424 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF395Q9H8N7 513 aaPredicted RBP21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF304Q9HCX3 659 aa21.01■□□□□ 0.95
CHMP2A-204ENST00000597848 A0A0G2JN53 185 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 SAP18O00422 153 aaKnown RBP21■□□□□ 0.95
CHMP2A-204ENST00000597848 TBX6O95947 436 aaPredicted RBP21■□□□□ 0.95
CHMP2A-204ENST00000597848 PIM1P11309 404 aaPredicted RBP21■□□□□ 0.95
CHMP2A-204ENST00000597848 ARRB2P32121 409 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 RAP1GDS1P52306 607 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 SLC9A5Q14940 896 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 NKAIN1Q4KMZ8 207 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 TMEM35AQ53FP2 167 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 SH2D4BQ5SQS7 431 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 DEPDC1Q5TB30 811 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 ARHGAP40Q5TG30 622 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 KHDRBS2Q5VWX1 349 aaKnown RBP21■□□□□ 0.95
CHMP2A-204ENST00000597848 TRIM40Q6P9F5 258 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 SCIMPQ6UWF3 145 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 PRSS41Q7RTY9 318 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 DTX1Q86Y01 620 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 CLYBLQ8N0X4 340 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF248Q8NDW4 579 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 OR2L5Q8NG80 312 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 ZDHHC19Q8WVZ1 309 aaPredicted RBP21■□□□□ 0.95
CHMP2A-204ENST00000597848 KCNE4Q8WWG9 221 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 MVB12AQ96EY5 273 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 HBEGFQ99075 208 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms