RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 HIST1H2AJQ99878 128 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 H2AFJQ9BTM1 129 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 FAM129AQ9BZQ8 928 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 PPANQ9NQ55 473 aaKnown RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 ASIC3Q9UHC3 531 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 IKZF3Q9UKT9 509 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NPIPA1Q9UND3 350 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 PCDHGB6Q9Y5F9 930 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 TACC2O95359 2948 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 ADGRG4Q8IZF6 3080 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 ASPDHA6ND91 283 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 NDC80O14777 642 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 TTC4O95801 387 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 SP1P08047 785 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 ESRRAP11474 423 aaPredicted RBP9.88□□□□□ -0.83
LSM4-205ENST00000597776 COX6B1P14854 86 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 MAOAP21397 527 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 IL10P22301 178 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 HNF4AP41235 474 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 TAS2R50P59544 299 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 BTG2P78543 158 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 HSF1Q00613 529 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 RGS1Q08116 209 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
LSM4-205ENST00000597776 PWP1Q13610 501 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 MAPKAPK3Q16644 382 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 BBS9Q3SYG4 887 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 HECTD2Q5U5R9 776 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 DUPD1Q68J44 220 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 TRMT10BQ6PF06 316 aaKnown RBP9.88□□□□□ -0.83
LSM4-205ENST00000597776 SPPL2CQ8IUH8 684 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 SIAH3Q8IW03 269 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 CNTN4Q8IWV2 1026 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 TMEM178AQ8NBL3 297 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 ELP5Q8TE02 316 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 ADAMTS18Q8TE60 1221 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 GRK7Q8WTQ7 553 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 THAP3Q8WTV1 239 aaPredicted RBP9.88□□□□□ -0.83
LSM4-205ENST00000597776 SLC5A11Q8WWX8 675 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 FBXL8Q96CD0 374 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 CERS2Q96G23 380 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 CFAP36Q96G28 342 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 PWWP2AQ96N64 755 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 OSBPL9Q96SU4 736 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 DDX47Q9H0S4 455 aaKnown RBP9.88□□□□□ -0.83
LSM4-205ENST00000597776 RHBGQ9H310 441 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 RUBCNLQ9H714 662 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 LRFN1Q9P244 771 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 ZNF835Q9Y2P0 537 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 TEP1Q99973 2627 aaKnown RBP9.88□□□□□ -0.83
LSM4-205ENST00000597776 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
LSM4-205ENST00000597776 CELSR1Q9NYQ6 3014 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 GOLGA6L10A0A0M3HER8 536 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 PABPN1LA6NDY0 278 aaKnown RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 C4orf51C9J302 202 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 C19orf84I3L1E1 186 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 DNALI1O14645 258 aaPredicted RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 PRMT3O60678 531 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 SLC25A12O75746 678 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 POU3F2P20265 443 aaPredicted RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 JAK1P23458 1154 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 TPP2P29144 1249 aaPredicted RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 SCTRP47872 440 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 AP1S2P56377 157 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 RAB8AP61006 207 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 REEP5Q00765 189 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 CSHL1Q14406 222 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 RNFT1Q5M7Z0 435 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 TEDDM1Q5T9Z0 273 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 SLC25A25Q6KCM7 469 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 XKRXQ6PP77 449 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 SBSNQ6UWP8 590 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 C3P1Q6ZMU1 363 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 Q6ZPB1 254 aaPredicted RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 KIAA0408Q6ZU52 694 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 ABHD13Q7L211 337 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 GDF7Q7Z4P5 450 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 STRA8Q7Z7C7 330 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 TMPRSS11BQ86T26 416 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 RPS19BP1Q86WX3 136 aaKnown RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 ZNF227Q86WZ6 799 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 LGI4Q8N135 537 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 ANKRD53Q8N9V6 530 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 GABPB2Q8TAK5 448 aaPredicted RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 NT5CQ8TCD5 201 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 ACTRT1Q8TDG2 376 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 PTCHD1Q96NR3 888 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 WDR83Q9BRX9 315 aaKnown RBP9.87□□□□□ -0.83
LSM4-205ENST00000597776 TRIM51Q9BSJ1 452 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 SARGQ9BW04 601 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 TRIM54Q9BYV2 358 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 TRIM8Q9BZR9 551 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 KLHL31Q9H511 634 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 CHST11Q9NPF2 352 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 ZFP69BQ9UJL9 534 aa9.87□□□□□ -0.83
LSM4-205ENST00000597776 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms