RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TMIGD1Q6UXZ0 262 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 LINC00696Q6ZRV3 163 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CEP128Q6ZU80 1094 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CCDC91Q7Z6B0 441 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 ANKRD37Q7Z713 158 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 TMPRSS11BQ86T26 416 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 ISCA2Q86U28 154 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CTAGE6Q86UF2 777 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 SHISA5Q8N114 240 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 PDPRQ8NCN5 879 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 STAG3L4Q8TBR4 150 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 BRIX1Q8TDN6 353 aaKnown RBP9.92□□□□□ -0.82
CCDC9-203ENST00000596938 TBC1D20Q96BZ9 403 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 PEX11GQ96HA9 241 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 C16orf45Q96MC5 204 aaPredicted RBP9.92□□□□□ -0.82
CCDC9-203ENST00000596938 TSPYL1Q9H0U9 437 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 EHD1Q9H4M9 534 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 NMRAL1Q9HBL8 299 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 LANCL2Q9NS86 450 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 ASF1BQ9NVP2 202 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 PTBP2Q9UKA9 531 aaKnown RBP9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CSAG2Q9Y5P2 127 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 PCM1Q15154 2024 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 ESYT3A0FGR9 886 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 CCDC189A1A4V9 331 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 DYTNA2CJ06 578 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 LRIT2A6NDA9 550 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 OR2W5A6NFC9 320 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 NCF1BA6NI72 391 aaPredicted RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 NCF1CA8MVU1 366 aaPredicted RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 SEC24DO94855 1032 aaPredicted RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 FHP07954 510 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF888P0CJ79 500 aaPredicted RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 SLC35E2BP0CK96 405 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 ITGAMP11215 1152 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 NCF1P14598 390 aaPredicted RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 JAK1P23458 1154 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 STXBP1P61764 594 aaKnown RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 PCDH1Q08174 1060 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 ABRAXAS2Q15018 415 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 GLE1Q53GS7 698 aaKnown RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 FHL5Q5TD97 284 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 MFSD4BQ5TF39 518 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 LANCL3Q6ZV70 420 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 RAPH1Q70E73 1250 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 TBC1D1Q86TI0 1168 aaPredicted RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 KRT78Q8N1N4 520 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 CATSPER1Q8NEC5 780 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 MNS1Q8NEH6 495 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 OR5T3Q8NGG3 340 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 M1APQ8TC57 530 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 WDR34Q96EX3 536 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 TMEM79Q9BSE2 394 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 UNKQ9C0B0 810 aaKnown RBP9.91□□□□□ -0.82
CCDC9-203ENST00000596938 RNF32Q9H0A6 362 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 KLHL31Q9H511 634 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 AGPAT4Q9NRZ5 378 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 DNAJC11Q9NVH1 559 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 STMN3Q9NZ72 180 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 WWOXQ9NZC7 414 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 CD274Q9NZQ7 290 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 PTGFRNQ9P2B2 879 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 TEKT2Q9UIF3 430 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 RNF112Q9ULX5 631 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 ACOT9Q9Y305 439 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 HECTD1Q9ULT8 2610 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 ANKRD12Q6UB98 2062 aa9.91□□□□□ -0.82
CCDC9-203ENST00000596938 IGHV3-20A0A0C4DH32 117 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF860A6NHJ4 632 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CLGNO14967 610 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 PRAMEF4O60810 478 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CLEC3AO75596 197 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 B3GALT4O96024 378 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 S100BP04271 92 aaPredicted RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CELA2AP08217 269 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 LTA4HP09960 611 aaKnown RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 MYBL2P10244 700 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 HPDP32754 393 aaPredicted RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 PHBP35232 272 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 HNF4AP41235 474 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CASP2P42575 452 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 HSPA7P48741 367 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 TNFSF10P50591 281 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 RAB8AP61006 207 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ARG2P78540 354 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ACTN3Q08043 901 aaPredicted RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 DLG1Q12959 904 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 LAPTM5Q13571 262 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 E2F2Q14209 437 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 SLBPQ14493 270 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 TBCCQ15814 346 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 EXT1Q16394 746 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 EIF2S3LQ2VIR3 472 aaKnown RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ABHD17BQ5VST6 288 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 PRAMEF9Q5VWM5 478 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CMC1Q7Z7K0 106 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 SIRT6Q8N6T7 355 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 OR1N1Q8NGS0 311 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms