RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 RPS27LQ71UM5 84 aaKnown RBP19.03■□□□□ 0.64
CCDC61-205ENST00000596161 COX15Q7KZN9 410 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 SYVN1Q86TM6 617 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 AFAP1L2Q8N4X5 818 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 OR9A4Q8NGU2 314 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 TRPC4APQ8TEL6 797 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.03■□□□□ 0.64
CCDC61-205ENST00000596161 SREK1Q8WXA9 508 aaKnown RBP19.03■□□□□ 0.64
CCDC61-205ENST00000596161 GAL3ST3Q96A11 431 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 PKNOX2Q96KN3 472 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 SLC26A1Q9H2B4 701 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 WDR54Q9H977 334 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 CPNE5Q9HCH3 593 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 SLC17A7Q9P2U7 560 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 WDFY3Q8IZQ1 3526 aa19.03■□□□□ 0.64
CCDC61-205ENST00000596161 ASPMQ8IZT6 3477 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 CREG1O75629 220 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 KLHL18O94889 574 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 ZNF888P0CJ79 500 aaPredicted RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TSPAN8P19075 237 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 WT1P19544 449 aaPredicted RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 PIK3CBP42338 1070 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 NAGLUP54802 743 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 PKNOX1P55347 436 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 CXADRP78310 365 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 OCA2Q04671 838 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TGM3Q08188 693 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 HYAL2Q12891 473 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 LCP2Q13094 533 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 PCLAFQ15004 111 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 ZRSR2Q15696 482 aaKnown RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 CRTC2Q53ET0 693 aaPredicted RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TTC19Q6DKK2 380 aaPredicted RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 VN1R5Q7Z5H4 357 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 DTWD1Q8N5C7 304 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 OR4F6Q8NGB9 312 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 UTP15Q8TED0 518 aaKnown RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 ZNF473Q8WTR7 871 aaKnown RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 CMTM7Q96FZ5 175 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 CDK15Q96Q40 435 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 ZNF382Q96SR6 550 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 CLK4Q9HAZ1 481 aaKnown RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TMBIM4Q9HC24 238 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TRPC4Q9UBN4 977 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 ZNF282Q9UDV7 671 aaPredicted RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TRPS1Q9UHF7 1281 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 TCFL5Q9UL49 500 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 MAP4K5Q9Y4K4 846 aa19.02■□□□□ 0.64
CCDC61-205ENST00000596161 MRPS18BQ9Y676 258 aaKnown RBP19.02■□□□□ 0.64
CCDC61-205ENST00000596161 A0A088AWK7 358 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 LRIT2A6NDA9 550 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 H3BQF6 201 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 TM9SF1O15321 606 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 TRIM13O60858 407 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 ZNF10P21506 573 aaPredicted RBP19.01■□□□□ 0.63
CCDC61-205ENST00000596161 FOLR3P41439 243 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 DDX39BQ13838 428 aaKnown RBP19.01■□□□□ 0.63
CCDC61-205ENST00000596161 ADPRMQ3LIE5 342 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 TMEM35AQ53FP2 167 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 TRIM40Q6P9F5 258 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 GPRIN3Q6ZVF9 776 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 CHSY3Q70JA7 882 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 C10orf107Q8IVU9 208 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 SRFBP1Q8NEF9 429 aaKnown RBP19.01■□□□□ 0.63
CCDC61-205ENST00000596161 ZBTB9Q96C00 473 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 FAR2Q96K12 515 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 CENPKQ9BS16 269 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 YIPF2Q9BWQ6 316 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 MS4A8Q9BY19 250 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 REXO4Q9GZR2 422 aaKnown RBP19.01■□□□□ 0.63
CCDC61-205ENST00000596161 GSTO2Q9H4Y5 243 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 VIPAS39Q9H9C1 493 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 MKKSQ9NPJ1 570 aaPredicted RBP19.01■□□□□ 0.63
CCDC61-205ENST00000596161 C14orf105Q9NVL8 296 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 PTRH2Q9Y3E5 179 aaKnown RBP19.01■□□□□ 0.63
CCDC61-205ENST00000596161 NAALAD2Q9Y3Q0 740 aa19.01■□□□□ 0.63
CCDC61-205ENST00000596161 ERI3O43414 337 aaKnown RBP19■□□□□ 0.63
CCDC61-205ENST00000596161 GALR3O60755 368 aaPredicted RBP19■□□□□ 0.63
CCDC61-205ENST00000596161 SMIM10L1P0DMW3 83 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 HNRNPH1P31943 449 aaKnown RBP19■□□□□ 0.63
CCDC61-205ENST00000596161 RAB8AP61006 207 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 RPS18P62269 152 aaKnown RBP19■□□□□ 0.63
CCDC61-205ENST00000596161 IFT88Q13099 833 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 NKG7Q16617 165 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 DEFB134Q4QY38 66 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 FRG2Q64ET8 278 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 ADNP2Q6IQ32 1131 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 C19orf48Q6RUI8 117 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 FRMD7Q6ZUT3 714 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 PRSS41Q7RTY9 318 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 AMER3Q8N944 861 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 OR2L5Q8NG80 312 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 OR2Y1Q8NGV0 311 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 HUS1BQ8NHY5 278 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 SNRNP27Q8WVK2 155 aaKnown RBP19■□□□□ 0.63
CCDC61-205ENST00000596161 MS4A6EQ96DS6 147 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 SMIM10Q96HG1 83 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 FRG2BQ96QU4 278 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 KLHL31Q9H511 634 aa19■□□□□ 0.63
CCDC61-205ENST00000596161 KCNK9Q9NPC2 374 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms