RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 OR51Q1Q8NH59 317 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SMIM10Q96HG1 83 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 FER1L6-AS2Q96M78 137 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SMAD5Q99717 465 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 VN1R1Q9GZP7 353 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 ANKZF1Q9H8Y5 726 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 ANKHQ9HCJ1 492 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 GPR83Q9NYM4 423 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 MKL2Q9ULH7 1088 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF490Q9ULM2 529 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 COL12A1Q99715 3063 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SETXQ7Z333 2677 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 PTPN13Q12923 2485 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SVILO95425 2214 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 PYCARD-AS1I3L0S3 204 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 CLGNO14967 610 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 SLC28A2O43868 658 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 KRT38O76015 456 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 WFS1O76024 890 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 SERPINA6P08185 405 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 ACPPP15309 386 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 CNTFP26441 200 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 TNFRSF8P28908 595 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 HNRNPH1P31943 449 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 HNF4AP41235 474 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 CASP2P42575 452 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 EMP2P54851 167 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 RAB8AP61006 207 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 OLR1P78380 273 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 RGS1Q08116 209 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 PCDH1Q08174 1060 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 NAA30Q147X3 362 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 MYBPC3Q14896 1274 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 HERC3Q15034 1050 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 PFKFB4Q16877 469 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 TUBB8Q3ZCM7 444 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 XKR6Q5GH73 641 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 TOR1AIP1Q5JTV8 583 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 FAAH2Q6GMR7 532 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 ADGRD1Q6QNK2 874 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 TMEM205Q6UW68 189 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 TAOK1Q7L7X3 1001 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 EIF1ADQ8N9N8 165 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 CLEC1AQ8NC01 280 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 PTCD3Q96EY7 689 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 CAPS2Q9BXY5 557 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 RBCK1Q9BYM8 510 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 EPN3Q9H201 632 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF552Q9H707 407 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 NT5DC2Q9H857 520 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 LANCL2Q9NS86 450 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 OPTCQ9UBM4 332 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 IKBKGQ9Y6K9 419 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 HIVEP3Q5T1R4 2406 aa10.38□□□□□ -0.75
SHKBP1-206ENST00000595523 ASH1LQ9NR48 2969 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 LOC102723996A0A087X1L8 192 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 IGHV1-45A0A0A0MS14 117 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 SYCE1LA8MT33 242 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 K7EPI3 171 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 CHST10O43529 356 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 FLNBO75369 2602 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 SIX3O95343 332 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 HPP00738 406 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 HEXBP07686 556 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 SNRPAP09012 282 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 SBK3P0C264 359 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 CXCR2P25025 360 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 CASRP41180 1078 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 CD97P48960 835 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ALDH18A1P54886 795 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 IRF8Q02556 426 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 EEF1A2Q05639 463 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 KLRB1Q12918 225 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 AIMP2Q13155 320 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 CHIT1Q13231 466 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 PCOLCEQ15113 449 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 PCBP2Q15366 365 aaKnown RBP eCLIP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 TBCCQ15814 346 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ADPRMQ3LIE5 342 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 NADK2Q4G0N4 442 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 VWA5B1Q5TIE3 1220 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 LANCL3Q6ZV70 420 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ABHD13Q7L211 337 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 KRT78Q8N1N4 520 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 TMEM151AQ8N4L1 468 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 RBMXL3Q8N7X1 1067 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 MZB1Q8WU39 189 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 MS4A6EQ96DS6 147 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 PEX11GQ96HA9 241 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 EFCAB11Q9BUY7 163 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 TRIM4Q9C037 500 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 PITHD1Q9GZP4 211 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 RHBGQ9H310 441 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ZBTB20Q9HC78 741 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF160Q9HCG1 818 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ATP13A2Q9NQ11 1180 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 CPSF2Q9P2I0 782 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms