RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 EPHA4P54764 986 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 UFM1P61960 85 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 ACTN3Q08043 901 aaPredicted RBP12.87□□□□□ -0.35
VMP1-217ENST00000593168 ZIC1Q15915 447 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 DEPDC1Q5TB30 811 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 NOXRED1Q6NXP6 359 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 GALNT18Q6P9A2 607 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 FIGLAQ6QHK4 219 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 BLOC1S3Q6QNY0 202 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 ZNF761Q86XN6 746 aaPredicted RBP12.87□□□□□ -0.35
VMP1-217ENST00000593168 METTL4Q8N3J2 472 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 LIX1Q8N485 282 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 GLB1L3Q8NCI6 653 aaPredicted RBP12.87□□□□□ -0.35
VMP1-217ENST00000593168 OR9I1Q8NGQ6 314 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 PROKR1Q8TCW9 393 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 SAP25Q8TEE9 199 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 MS4A8Q9BY19 250 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 OR51B5Q9H339 312 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 ACTL8Q9H568 366 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.35
VMP1-217ENST00000593168 TAS2R1Q9NYW7 299 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 NLGN3Q9NZ94 848 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 POMT2Q9UKY4 750 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 GOLGA4Q13439 2230 aaKnown RBP12.86□□□□□ -0.35
VMP1-217ENST00000593168 FAM234BA2RU67 622 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 ZW10O43264 779 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 PRMT3O60678 531 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 TBX6O95947 436 aaPredicted RBP12.86□□□□□ -0.35
VMP1-217ENST00000593168 ALPPL2P10696 532 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 BCKDHAP12694 445 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 GLB1P16278 677 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 TYRP1P17643 537 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 BCL6P41182 706 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 GPR3P46089 330 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 CAPZBP47756 277 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 CPA2P48052 419 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 CCT8P50990 548 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 NME5P56597 212 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 CLDN8P56748 225 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 RPS15AP62244 130 aaKnown RBP12.86□□□□□ -0.35
VMP1-217ENST00000593168 NR1D2Q14995 579 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 COQ5Q5HYK3 327 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 ZCCHC8Q6NZY4 707 aaKnown RBP12.86□□□□□ -0.35
VMP1-217ENST00000593168 FBXO42Q6P3S6 717 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 RINLQ6ZS11 566 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 GK5Q6ZS86 529 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 ZNF438Q7Z4V0 828 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 SLC35F3Q8IY50 421 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
VMP1-217ENST00000593168 KYQ8NBH2 561 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 CREB3L4Q8TEY5 395 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 RAB33BQ9H082 229 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 ABCG4Q9H172 646 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 EPB41L1Q9H4G0 881 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 EFCAB1Q9HAE3 211 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 PRM3Q9NNZ6 103 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 DLGAP4Q9Y2H0 992 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 AP1M2Q9Y6Q5 423 aa12.86□□□□□ -0.35
VMP1-217ENST00000593168 SNRNP200O75643 2136 aaKnown RBP12.86□□□□□ -0.35
VMP1-217ENST00000593168 CFAP73A6NFT4 308 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 BBIP1A8MTZ0 92 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 HAT1O14929 419 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 GYG2O15488 501 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 NRP2O60462 931 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 SDC1P18827 310 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 MAGP20916 626 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 TIA1P31483 386 aaKnown RBP eCLIP12.85□□□□□ -0.35
VMP1-217ENST00000593168 ZFP36L2P47974 494 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 POLR2JP52435 117 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 ARFIP1P53367 373 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 KCNK10P57789 538 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 RAE1P78406 368 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 RCAN2Q14206 197 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 PTGR1Q14914 329 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 DNAL1Q4LDG9 190 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 TMEM35AQ53FP2 167 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 KHDRBS2Q5VWX1 349 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 FCRL6Q6DN72 434 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 TRIM73Q86UV7 250 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 FAM181AQ8N9Y4 354 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 RBM15BQ8NDT2 890 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 OR6C4Q8NGE1 309 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 SPDL1Q96EA4 605 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 TEX37Q96LM6 180 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 ZBTB18Q99592 522 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 CENPKQ9BS16 269 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 MRPL1Q9BYD6 325 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 DPY30Q9C005 99 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 SLC52A3Q9NQ40 469 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 LRIT1Q9P2V4 623 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 EPHA6Q9UF33 1036 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms